RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 SMCO4Q9NRQ5 59 aa8.96□□□□□ -0.98
HDDC2-210ENST00000609574 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
HDDC2-210ENST00000609574 DAND5Q8N907 189 aa8.95□□□□□ -0.98
HDDC2-210ENST00000609574 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
HDDC2-210ENST00000609574 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
HDDC2-210ENST00000609574 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
HDDC2-210ENST00000609574 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
HDDC2-210ENST00000609574 ATP6V1G1O75348 118 aa8.92□□□□□ -0.98
HDDC2-210ENST00000609574 LINC00158P58513 81 aa8.92□□□□□ -0.98
HDDC2-210ENST00000609574 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
HDDC2-210ENST00000609574 S100A12P80511 92 aa8.91□□□□□ -0.98
HDDC2-210ENST00000609574 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
HDDC2-210ENST00000609574 TRAV9-1A0A075B6T8 112 aa8.89□□□□□ -0.99
HDDC2-210ENST00000609574 ETDCA0A1B0GVM5 59 aa8.89□□□□□ -0.99
HDDC2-210ENST00000609574 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
HDDC2-210ENST00000609574 PRYO14603 147 aa8.88□□□□□ -0.99
HDDC2-210ENST00000609574 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
HDDC2-210ENST00000609574 S100PP25815 95 aa8.88□□□□□ -0.99
HDDC2-210ENST00000609574 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
HDDC2-210ENST00000609574 SLC25A20O43772 301 aa8.87□□□□□ -0.99
HDDC2-210ENST00000609574 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
HDDC2-210ENST00000609574 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
HDDC2-210ENST00000609574 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
HDDC2-210ENST00000609574 COX19Q49B96 90 aa8.85□□□□□ -0.99
HDDC2-210ENST00000609574 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
HDDC2-210ENST00000609574 Q8NDZ9 215 aa8.85□□□□□ -0.99
HDDC2-210ENST00000609574 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
HDDC2-210ENST00000609574 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
HDDC2-210ENST00000609574 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
HDDC2-210ENST00000609574 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
HDDC2-210ENST00000609574 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
HDDC2-210ENST00000609574 MOBPQ13875 183 aa8.82□□□□□ -1
HDDC2-210ENST00000609574 LINC00483Q53H64 154 aa8.82□□□□□ -1
HDDC2-210ENST00000609574 BAGE3Q86Y29 109 aa8.82□□□□□ -1
HDDC2-210ENST00000609574 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
HDDC2-210ENST00000609574 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
HDDC2-210ENST00000609574 Q8N377 158 aa8.81□□□□□ -1
HDDC2-210ENST00000609574 LINC00587B1AMM8 73 aa8.8□□□□□ -1
HDDC2-210ENST00000609574 NCR3O14931 201 aa8.8□□□□□ -1
HDDC2-210ENST00000609574 XP32Q5T750 250 aa8.8□□□□□ -1
HDDC2-210ENST00000609574 C11orf86A6NJI1 115 aa8.79□□□□□ -1
HDDC2-210ENST00000609574 HBDP02042 147 aa8.79□□□□□ -1
HDDC2-210ENST00000609574 CFC1BP0CG36 223 aa8.79□□□□□ -1
HDDC2-210ENST00000609574 SPRR1AP35321 89 aa8.79□□□□□ -1
HDDC2-210ENST00000609574 SEC11CQ9BY50 192 aa8.79□□□□□ -1
HDDC2-210ENST00000609574 LINC00614P0C842 121 aa8.78□□□□□ -1
HDDC2-210ENST00000609574 SMIM13P0DJ93 91 aa8.78□□□□□ -1
HDDC2-210ENST00000609574 MAP1LC3CQ9BXW4 147 aa8.77□□□□□ -1.01
HDDC2-210ENST00000609574 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
HDDC2-210ENST00000609574 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
HDDC2-210ENST00000609574 HERV-K104P63124 156 aa8.76□□□□□ -1.01
HDDC2-210ENST00000609574 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
HDDC2-210ENST00000609574 MIR7-3HGQ8N6C7 128 aa8.75□□□□□ -1.01
HDDC2-210ENST00000609574 B5MCH6 92 aa8.74□□□□□ -1.01
HDDC2-210ENST00000609574 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
HDDC2-210ENST00000609574 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
HDDC2-210ENST00000609574 PMCHL1Q16048 86 aa8.73□□□□□ -1.01
HDDC2-210ENST00000609574 A0A096LNJ9 63 aa8.72□□□□□ -1.01
HDDC2-210ENST00000609574 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
HDDC2-210ENST00000609574 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
HDDC2-210ENST00000609574 TMEM218A2RU14 115 aa8.71□□□□□ -1.02
HDDC2-210ENST00000609574 DDTP30046 118 aa8.71□□□□□ -1.02
HDDC2-210ENST00000609574 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
HDDC2-210ENST00000609574 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
HDDC2-210ENST00000609574 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
HDDC2-210ENST00000609574 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
HDDC2-210ENST00000609574 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
HDDC2-210ENST00000609574 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
HDDC2-210ENST00000609574 C18orf32Q8TCD1 76 aa8.69□□□□□ -1.02
HDDC2-210ENST00000609574 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
HDDC2-210ENST00000609574 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
HDDC2-210ENST00000609574 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
HDDC2-210ENST00000609574 Q6ZRX8 168 aa8.68□□□□□ -1.02
HDDC2-210ENST00000609574 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
HDDC2-210ENST00000609574 MT1HP80294 61 aa8.67□□□□□ -1.02
HDDC2-210ENST00000609574 CLLU1Q5K131 121 aa8.67□□□□□ -1.02
HDDC2-210ENST00000609574 URB1-AS1Q96HZ7 61 aa8.67□□□□□ -1.02
HDDC2-210ENST00000609574 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
HDDC2-210ENST00000609574 M0R2T5 61 aa8.66□□□□□ -1.02
HDDC2-210ENST00000609574 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
HDDC2-210ENST00000609574 Q9BRP9 147 aa8.66□□□□□ -1.02
HDDC2-210ENST00000609574 RPS10P5Q9NQ39 176 aa8.66□□□□□ -1.02
HDDC2-210ENST00000609574 IFI27L1Q96BM0 104 aa8.65□□□□□ -1.02
HDDC2-210ENST00000609574 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
HDDC2-210ENST00000609574 IFITM2Q01629 132 aa8.64□□□□□ -1.03
HDDC2-210ENST00000609574 SLC25A34Q6PIV7 304 aa8.64□□□□□ -1.03
HDDC2-210ENST00000609574 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
HDDC2-210ENST00000609574 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
HDDC2-210ENST00000609574 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
HDDC2-210ENST00000609574 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
HDDC2-210ENST00000609574 RHEBQ15382 184 aa8.63□□□□□ -1.03
HDDC2-210ENST00000609574 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
HDDC2-210ENST00000609574 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
HDDC2-210ENST00000609574 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
HDDC2-210ENST00000609574 HRCT1Q6UXD1 115 aa8.6□□□□□ -1.03
HDDC2-210ENST00000609574 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
HDDC2-210ENST00000609574 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
HDDC2-210ENST00000609574 KRTAP19-2Q3LHN2 52 aa8.59□□□□□ -1.03
HDDC2-210ENST00000609574 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
HDDC2-210ENST00000609574 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms