RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	LBH	Q53QV2	105 aa	Predicted RBP	11.14	□□□□□ -0.63
LTBP4-231	ENST00000602251	KRTAP7-1	Q8IUC3	87 aa		11.14	□□□□□ -0.63
LTBP4-231	ENST00000602251	C22orf24	Q9Y442	160 aa		11.13	□□□□□ -0.63
LTBP4-231	ENST00000602251	DPM2	O94777	84 aa		11.12	□□□□□ -0.63
LTBP4-231	ENST00000602251	ATP6V1G1	O75348	118 aa		11.11	□□□□□ -0.63
LTBP4-231	ENST00000602251	HERVK_113	P61574	105 aa		11.11	□□□□□ -0.63
LTBP4-231	ENST00000602251	PMCHL2	Q9BQD1	86 aa		11.11	□□□□□ -0.63
LTBP4-231	ENST00000602251	IGKC	P01834	107 aa		11.1	□□□□□ -0.63
LTBP4-231	ENST00000602251	LINC00158	P58513	81 aa		11.1	□□□□□ -0.63
LTBP4-231	ENST00000602251	MRPL55	Q7Z7F7	128 aa	Known RBP	11.1	□□□□□ -0.63
LTBP4-231	ENST00000602251	NKAPP1	Q8N9T2	125 aa		11.1	□□□□□ -0.63
LTBP4-231	ENST00000602251	DIRC1	Q969H9	104 aa		11.1	□□□□□ -0.63
LTBP4-231	ENST00000602251	TP73-AS1	Q9UF72	201 aa		11.09	□□□□□ -0.63
LTBP4-231	ENST00000602251	IGLV7-43	P04211	117 aa		11.08	□□□□□ -0.64
LTBP4-231	ENST00000602251	MEIG1	Q5JSS6	88 aa		11.08	□□□□□ -0.64
LTBP4-231	ENST00000602251	KRTAP11-1	Q8IUC1	163 aa		11.08	□□□□□ -0.64
LTBP4-231	ENST00000602251	SND1-IT1	Q9HBX3	110 aa		11.08	□□□□□ -0.64
LTBP4-231	ENST00000602251		A0A0U1RRA0	63 aa		11.07	□□□□□ -0.64
LTBP4-231	ENST00000602251	MYMX	A0A1B0GTQ4	84 aa		11.07	□□□□□ -0.64
LTBP4-231	ENST00000602251	HERV-K104	P63124	156 aa		11.07	□□□□□ -0.64
LTBP4-231	ENST00000602251	PLEKHB2	Q96CS7	222 aa		11.07	□□□□□ -0.64
LTBP4-231	ENST00000602251	NDUFA12	Q9UI09	145 aa		11.07	□□□□□ -0.64
LTBP4-231	ENST00000602251	IGLV1-50	A0A075B6I6	118 aa		11.06	□□□□□ -0.64
LTBP4-231	ENST00000602251	LINC00587	B1AMM8	73 aa		11.06	□□□□□ -0.64
LTBP4-231	ENST00000602251	SYS1-DBNDD2	H3BUS1	97 aa		11.06	□□□□□ -0.64
LTBP4-231	ENST00000602251	LEPROT	O15243	131 aa		11.06	□□□□□ -0.64
LTBP4-231	ENST00000602251		H0Y9J4	135 aa		11.05	□□□□□ -0.64
LTBP4-231	ENST00000602251	RPL24	P83731	157 aa	Known RBP	11.05	□□□□□ -0.64
LTBP4-231	ENST00000602251	GAGE10	A6NGK3	116 aa		11.04	□□□□□ -0.64
LTBP4-231	ENST00000602251	LGALS3	P17931	250 aa	Known RBP	11.04	□□□□□ -0.64
LTBP4-231	ENST00000602251	COA6	Q5JTJ3	125 aa	Known RBP	11.04	□□□□□ -0.64
LTBP4-231	ENST00000602251	LINC00167	Q96N53	147 aa		11.04	□□□□□ -0.64
LTBP4-231	ENST00000602251	IGLV5-37	A0A075B6J1	123 aa		11.03	□□□□□ -0.64
LTBP4-231	ENST00000602251	RPL37AP8	A6NKH3	93 aa		11.03	□□□□□ -0.64
LTBP4-231	ENST00000602251		J3QQQ9	107 aa		11.03	□□□□□ -0.64
LTBP4-231	ENST00000602251	SMIM13	P0DJ93	91 aa		11.03	□□□□□ -0.64
LTBP4-231	ENST00000602251	KRTAP1-4	P0C5Y4	121 aa		11.02	□□□□□ -0.65
LTBP4-231	ENST00000602251	PET117	Q6UWS5	81 aa		11.02	□□□□□ -0.65
LTBP4-231	ENST00000602251	NMU	P48645	174 aa		11	□□□□□ -0.65
LTBP4-231	ENST00000602251	KRTDAP	P60985	99 aa		11	□□□□□ -0.65
LTBP4-231	ENST00000602251	VPREB1	P12018	145 aa		10.99	□□□□□ -0.65
LTBP4-231	ENST00000602251	TSPEAR-AS2	P59090	65 aa		10.99	□□□□□ -0.65
LTBP4-231	ENST00000602251	MIR7-3HG	Q8N6C7	128 aa		10.99	□□□□□ -0.65
LTBP4-231	ENST00000602251	C3orf79	P0CE67	100 aa		10.98	□□□□□ -0.65
LTBP4-231	ENST00000602251	LINC01545	Q5VT33	79 aa		10.98	□□□□□ -0.65
LTBP4-231	ENST00000602251	IGKV2-28	A0A075B6P5	120 aa		10.97	□□□□□ -0.65
LTBP4-231	ENST00000602251	IGKV2D-28	P01615	120 aa		10.97	□□□□□ -0.65
LTBP4-231	ENST00000602251	C20orf202	A1L168	122 aa		10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251		E9PLD3	99 aa		10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	ZNF861P	O60384	105 aa		10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	BCE1	O60756	84 aa		10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	RPL13A	P40429	203 aa	Known RBP	10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	RPL28	P46779	137 aa	Known RBP	10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	BOD1L2	Q8IYS8	172 aa		10.96	□□□□□ -0.65
LTBP4-231	ENST00000602251	S100A6	P06703	90 aa		10.93	□□□□□ -0.66
LTBP4-231	ENST00000602251	S100A2	P29034	98 aa		10.93	□□□□□ -0.66
LTBP4-231	ENST00000602251	UBE2A	P49459	152 aa		10.93	□□□□□ -0.66
LTBP4-231	ENST00000602251	MIEN1	Q9BRT3	115 aa		10.93	□□□□□ -0.66
LTBP4-231	ENST00000602251		M0R378	163 aa		10.92	□□□□□ -0.66
LTBP4-231	ENST00000602251	TSPAN13	O95857	204 aa		10.92	□□□□□ -0.66
LTBP4-231	ENST00000602251	DAND5	Q8N907	189 aa		10.92	□□□□□ -0.66
LTBP4-231	ENST00000602251	FSIP2	Q5CZC0	6907 aa		10.91	□□□□□ -0.66
LTBP4-231	ENST00000602251		Q8NDZ9	215 aa		10.91	□□□□□ -0.66
LTBP4-231	ENST00000602251	AKR1D1	P51857	326 aa		10.9	□□□□□ -0.66
LTBP4-231	ENST00000602251		A0A0J9YXY3	114 aa		10.89	□□□□□ -0.67
LTBP4-231	ENST00000602251	NCR3	O14931	201 aa		10.89	□□□□□ -0.67
LTBP4-231	ENST00000602251	MUC17	Q685J3	4493 aa		10.89	□□□□□ -0.67
LTBP4-231	ENST00000602251	FAM19A1	Q7Z5A9	133 aa		10.88	□□□□□ -0.67
LTBP4-231	ENST00000602251	TMEM126A	Q9H061	195 aa		10.88	□□□□□ -0.67
LTBP4-231	ENST00000602251	IGKV2D-26	A0A0A0MRZ7	120 aa		10.87	□□□□□ -0.67
LTBP4-231	ENST00000602251	TMEM238	C9JI98	176 aa		10.87	□□□□□ -0.67
LTBP4-231	ENST00000602251	S100A12	P80511	92 aa		10.87	□□□□□ -0.67
LTBP4-231	ENST00000602251	CRCT1	Q9UGL9	99 aa		10.87	□□□□□ -0.67
LTBP4-231	ENST00000602251	ZNF815P	A8K554	130 aa		10.86	□□□□□ -0.67
LTBP4-231	ENST00000602251	LCE2D	Q5TA82	110 aa	Predicted RBP	10.86	□□□□□ -0.67
LTBP4-231	ENST00000602251	HIST3H2BB	Q8N257	126 aa		10.86	□□□□□ -0.67
LTBP4-231	ENST00000602251	LOC107984156	A0A0G2JMH3	177 aa		10.85	□□□□□ -0.67
LTBP4-231	ENST00000602251	ARL17A	Q8IVW1	177 aa		10.85	□□□□□ -0.67
LTBP4-231	ENST00000602251	NPC2	P61916	151 aa		10.84	□□□□□ -0.67
LTBP4-231	ENST00000602251	PRLH	P81277	87 aa		10.84	□□□□□ -0.67
LTBP4-231	ENST00000602251	ATOH7	Q8N100	152 aa		10.84	□□□□□ -0.67
LTBP4-231	ENST00000602251	HIST1H2BL	Q99880	126 aa		10.83	□□□□□ -0.68
LTBP4-231	ENST00000602251	PRY	O14603	147 aa		10.82	□□□□□ -0.68
LTBP4-231	ENST00000602251	ADAMTSL4-AS1	Q5T5F5	129 aa		10.82	□□□□□ -0.68
LTBP4-231	ENST00000602251	TIMM17B	O60830	172 aa		10.81	□□□□□ -0.68
LTBP4-231	ENST00000602251	SCGB1D4	Q6XE38	83 aa		10.81	□□□□□ -0.68
LTBP4-231	ENST00000602251	KRTAP13-1	Q8IUC0	172 aa		10.81	□□□□□ -0.68
LTBP4-231	ENST00000602251	TTTY13	Q9BZ97	58 aa		10.81	□□□□□ -0.68
LTBP4-231	ENST00000602251	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-231	ENST00000602251	TRBV10-3	A0A0K0K1G6	114 aa		10.8	□□□□□ -0.68
LTBP4-231	ENST00000602251	TRBV10-2	A0A0K0K1G8	114 aa		10.8	□□□□□ -0.68
LTBP4-231	ENST00000602251	NDUFC2	O95298	119 aa		10.8	□□□□□ -0.68
LTBP4-231	ENST00000602251	S100A7L2	Q5SY68	101 aa		10.8	□□□□□ -0.68
LTBP4-231	ENST00000602251	DDT	P30046	118 aa		10.79	□□□□□ -0.68
LTBP4-231	ENST00000602251	SNRPE	P62304	92 aa	Known RBP	10.79	□□□□□ -0.68
LTBP4-231	ENST00000602251	ANKRD39	Q53RE8	183 aa		10.79	□□□□□ -0.68
LTBP4-231	ENST00000602251	KCNQ1DN	Q9H478	68 aa		10.79	□□□□□ -0.68
LTBP4-231	ENST00000602251	ETDC	A0A1B0GVM5	59 aa		10.78	□□□□□ -0.68
LTBP4-231	ENST00000602251	HIGD2A	Q9BW72	106 aa		10.78	□□□□□ -0.68
LTBP4-231	ENST00000602251	HSBP1L1	C9JCN9	74 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms