RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
SSBP4-210ENST00000601444 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
SSBP4-210ENST00000601444 HERV-K104P63124 156 aa12.3□□□□□ -0.44
SSBP4-210ENST00000601444 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
SSBP4-210ENST00000601444 Q8NDZ9 215 aa12.3□□□□□ -0.44
SSBP4-210ENST00000601444 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
SSBP4-210ENST00000601444 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
SSBP4-210ENST00000601444 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-210ENST00000601444 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
SSBP4-210ENST00000601444 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
SSBP4-210ENST00000601444 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
SSBP4-210ENST00000601444 J3QL48 77 aa12.28□□□□□ -0.44
SSBP4-210ENST00000601444 SPINK6Q6UWN8 80 aa12.28□□□□□ -0.44
SSBP4-210ENST00000601444 E9PLD3 99 aa12.27□□□□□ -0.45
SSBP4-210ENST00000601444 OXTP01178 125 aa12.27□□□□□ -0.45
SSBP4-210ENST00000601444 IGLV7-43P04211 117 aa12.27□□□□□ -0.45
SSBP4-210ENST00000601444 VPREB1P12018 145 aa12.27□□□□□ -0.45
SSBP4-210ENST00000601444 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
SSBP4-210ENST00000601444 HIST3H2BBQ8N257 126 aa12.27□□□□□ -0.45
SSBP4-210ENST00000601444 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
SSBP4-210ENST00000601444 NKAPP1Q8N9T2 125 aa12.26□□□□□ -0.45
SSBP4-210ENST00000601444 HERC1Q15751 4861 aa12.24□□□□□ -0.45
SSBP4-210ENST00000601444 NMUP48645 174 aa12.23□□□□□ -0.45
SSBP4-210ENST00000601444 DAND5Q8N907 189 aa12.23□□□□□ -0.45
SSBP4-210ENST00000601444 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
SSBP4-210ENST00000601444 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
SSBP4-210ENST00000601444 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
SSBP4-210ENST00000601444 S100A6P06703 90 aa12.22□□□□□ -0.45
SSBP4-210ENST00000601444 RPL24P83731 157 aaKnown RBP12.22□□□□□ -0.45
SSBP4-210ENST00000601444 S100A2P29034 98 aa12.21□□□□□ -0.45
SSBP4-210ENST00000601444 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
SSBP4-210ENST00000601444 IGKV2-28A0A075B6P5 120 aa12.2□□□□□ -0.46
SSBP4-210ENST00000601444 IGKV2D-28P01615 120 aa12.2□□□□□ -0.46
SSBP4-210ENST00000601444 SNRPEP62304 92 aaKnown RBP12.2□□□□□ -0.46
SSBP4-210ENST00000601444 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
SSBP4-210ENST00000601444 C20orf202A1L168 122 aa12.19□□□□□ -0.46
SSBP4-210ENST00000601444 MT1HL1P0DM35 61 aa12.19□□□□□ -0.46
SSBP4-210ENST00000601444 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
SSBP4-210ENST00000601444 TTTY13Q9BZ97 58 aa12.19□□□□□ -0.46
SSBP4-210ENST00000601444 DMBT1Q9UGM3 2413 aaPredicted RBP12.19□□□□□ -0.46
SSBP4-210ENST00000601444 IGLV1-50A0A075B6I6 118 aa12.17□□□□□ -0.46
SSBP4-210ENST00000601444 ADAMTSL4-AS1Q5T5F5 129 aa12.17□□□□□ -0.46
SSBP4-210ENST00000601444 BCE1O60756 84 aa12.16□□□□□ -0.46
SSBP4-210ENST00000601444 ANKRD39Q53RE8 183 aa12.16□□□□□ -0.46
SSBP4-210ENST00000601444 REG3GQ6UW15 175 aa12.16□□□□□ -0.46
SSBP4-210ENST00000601444 LINC01600Q96MT4 127 aa12.16□□□□□ -0.46
SSBP4-210ENST00000601444 DIRC1Q969H9 104 aa12.15□□□□□ -0.46
SSBP4-210ENST00000601444 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
SSBP4-210ENST00000601444 H0Y9J4 135 aa12.14□□□□□ -0.47
SSBP4-210ENST00000601444 NCR3O14931 201 aa12.14□□□□□ -0.47
SSBP4-210ENST00000601444 ZNF861PO60384 105 aa12.14□□□□□ -0.47
SSBP4-210ENST00000601444 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 M0R378 163 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-210ENST00000601444 NPC2P61916 151 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 ARL17AQ8IVW1 177 aa12.13□□□□□ -0.47
SSBP4-210ENST00000601444 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
SSBP4-210ENST00000601444 LITAFQ99732 161 aa12.12□□□□□ -0.47
SSBP4-210ENST00000601444 TNXBP22105 4242 aa12.12□□□□□ -0.47
SSBP4-210ENST00000601444 TMEM126AQ9H061 195 aa12.11□□□□□ -0.47
SSBP4-210ENST00000601444 AKR1D1P51857 326 aa12.1□□□□□ -0.47
SSBP4-210ENST00000601444 RPL28P46779 137 aaKnown RBP12.08□□□□□ -0.48
SSBP4-210ENST00000601444 KRTAP10-8P60410 259 aa12.08□□□□□ -0.48
SSBP4-210ENST00000601444 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
SSBP4-210ENST00000601444 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
SSBP4-210ENST00000601444 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
SSBP4-210ENST00000601444 MIEN1Q9BRT3 115 aa12.07□□□□□ -0.48
SSBP4-210ENST00000601444 UBE2AP49459 152 aa12.06□□□□□ -0.48
SSBP4-210ENST00000601444 PRLHP81277 87 aa12.06□□□□□ -0.48
SSBP4-210ENST00000601444 TRBV10-3A0A0K0K1G6 114 aa12.05□□□□□ -0.48
SSBP4-210ENST00000601444 TIMM17BO60830 172 aa12.05□□□□□ -0.48
SSBP4-210ENST00000601444 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
SSBP4-210ENST00000601444 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
SSBP4-210ENST00000601444 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
SSBP4-210ENST00000601444 NDUFC2O95298 119 aa12.03□□□□□ -0.48
SSBP4-210ENST00000601444 SCGB1D1O95968 90 aa12.02□□□□□ -0.49
SSBP4-210ENST00000601444 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.49
SSBP4-210ENST00000601444 TRBV10-2A0A0K0K1G8 114 aa12.01□□□□□ -0.49
SSBP4-210ENST00000601444 KCNQ1DNQ9H478 68 aa12.01□□□□□ -0.49
SSBP4-210ENST00000601444 SPANXB1Q9NS25 103 aaPredicted RBP12.01□□□□□ -0.49
SSBP4-210ENST00000601444 PRYO14603 147 aa12□□□□□ -0.49
SSBP4-210ENST00000601444 DDTP30046 118 aa12□□□□□ -0.49
SSBP4-210ENST00000601444 SPRR1AP35321 89 aa11.98□□□□□ -0.49
SSBP4-210ENST00000601444 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
SSBP4-210ENST00000601444 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
SSBP4-210ENST00000601444 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
SSBP4-210ENST00000601444 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
SSBP4-210ENST00000601444 KRTAP4-16G5E9R7 235 aaPredicted RBP11.96□□□□□ -0.49
SSBP4-210ENST00000601444 IGLV6-57P01721 117 aa11.96□□□□□ -0.49
SSBP4-210ENST00000601444 S100A7L2Q5SY68 101 aa11.96□□□□□ -0.49
SSBP4-210ENST00000601444 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
SSBP4-210ENST00000601444 HIGD2AQ9BW72 106 aa11.94□□□□□ -0.5
SSBP4-210ENST00000601444 A0A087X002 238 aa11.92□□□□□ -0.5
SSBP4-210ENST00000601444 ETDCA0A1B0GVM5 59 aa11.92□□□□□ -0.5
SSBP4-210ENST00000601444 TMA7Q9Y2S6 64 aaKnown RBP11.92□□□□□ -0.5
SSBP4-210ENST00000601444 S100A12P80511 92 aa11.91□□□□□ -0.5
SSBP4-210ENST00000601444 MUSTN1Q8IVN3 82 aa11.91□□□□□ -0.5
SSBP4-210ENST00000601444 B5MCH6 92 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms