RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
HERC3-214ENST00000601319 H0Y8G0 127 aa10.34□□□□□ -0.75
HERC3-214ENST00000601319 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
HERC3-214ENST00000601319 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
HERC3-214ENST00000601319 HERV-K104P63124 156 aa10.33□□□□□ -0.76
HERC3-214ENST00000601319 LINC00158P58513 81 aa10.32□□□□□ -0.76
HERC3-214ENST00000601319 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
HERC3-214ENST00000601319 SCO1O75880 301 aa10.31□□□□□ -0.76
HERC3-214ENST00000601319 DPM2O94777 84 aa10.31□□□□□ -0.76
HERC3-214ENST00000601319 FABP4P15090 132 aa10.31□□□□□ -0.76
HERC3-214ENST00000601319 KRTAP13-1Q8IUC0 172 aa10.31□□□□□ -0.76
HERC3-214ENST00000601319 Q8NDZ9 215 aa10.31□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BKO60814 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BJP06899 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BOP23527 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BBP33778 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BDP58876 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BCP62807 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST2H2BEQ16778 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BHQ93079 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BNQ99877 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 HIST1H2BMQ99879 126 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
HERC3-214ENST00000601319 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 LEPROTO15243 131 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
HERC3-214ENST00000601319 PLEKHB2Q96CS7 222 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
HERC3-214ENST00000601319 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
HERC3-214ENST00000601319 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
HERC3-214ENST00000601319 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
HERC3-214ENST00000601319 IGKCP01834 107 aa10.27□□□□□ -0.77
HERC3-214ENST00000601319 HERVK_113P61574 105 aa10.27□□□□□ -0.77
HERC3-214ENST00000601319 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
HERC3-214ENST00000601319 A0A0U1RRA0 63 aa10.26□□□□□ -0.77
HERC3-214ENST00000601319 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
HERC3-214ENST00000601319 UBE2AP49459 152 aa10.26□□□□□ -0.77
HERC3-214ENST00000601319 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
HERC3-214ENST00000601319 J3QQQ9 107 aa10.25□□□□□ -0.77
HERC3-214ENST00000601319 NMUP48645 174 aa10.25□□□□□ -0.77
HERC3-214ENST00000601319 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
HERC3-214ENST00000601319 PMCHL2Q9BQD1 86 aa10.25□□□□□ -0.77
HERC3-214ENST00000601319 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
HERC3-214ENST00000601319 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
HERC3-214ENST00000601319 M0R378 163 aa10.23□□□□□ -0.77
HERC3-214ENST00000601319 IGKV2D-26A0A0A0MRZ7 120 aa10.22□□□□□ -0.77
HERC3-214ENST00000601319 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
HERC3-214ENST00000601319 COA6Q5JTJ3 125 aaKnown RBP10.22□□□□□ -0.77
HERC3-214ENST00000601319 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
HERC3-214ENST00000601319 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.77
HERC3-214ENST00000601319 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.77
HERC3-214ENST00000601319 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.77
HERC3-214ENST00000601319 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
HERC3-214ENST00000601319 E9PLD3 99 aa10.2□□□□□ -0.78
HERC3-214ENST00000601319 PRLHP81277 87 aa10.2□□□□□ -0.78
HERC3-214ENST00000601319 FAM19A1Q7Z5A9 133 aa10.2□□□□□ -0.78
HERC3-214ENST00000601319 LRP2P98164 4655 aa10.19□□□□□ -0.78
HERC3-214ENST00000601319 A0A087X002 238 aa10.19□□□□□ -0.78
HERC3-214ENST00000601319 LINC01545Q5VT33 79 aa10.19□□□□□ -0.78
HERC3-214ENST00000601319 PRYO14603 147 aa10.18□□□□□ -0.78
HERC3-214ENST00000601319 CRYGAP11844 174 aa10.18□□□□□ -0.78
HERC3-214ENST00000601319 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
HERC3-214ENST00000601319 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
HERC3-214ENST00000601319 NCR3O14931 201 aa10.16□□□□□ -0.78
HERC3-214ENST00000601319 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
HERC3-214ENST00000601319 SPRR1AP35321 89 aa10.15□□□□□ -0.78
HERC3-214ENST00000601319 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
HERC3-214ENST00000601319 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
HERC3-214ENST00000601319 DAND5Q8N907 189 aa10.15□□□□□ -0.78
HERC3-214ENST00000601319 TRBV10-2A0A0K0K1G8 114 aa10.14□□□□□ -0.79
HERC3-214ENST00000601319 MIEN1Q9BRT3 115 aa10.14□□□□□ -0.79
HERC3-214ENST00000601319 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
HERC3-214ENST00000601319 NDUFC2O95298 119 aa10.13□□□□□ -0.79
HERC3-214ENST00000601319 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
HERC3-214ENST00000601319 SPANXB1Q9NS25 103 aaPredicted RBP10.13□□□□□ -0.79
HERC3-214ENST00000601319 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
HERC3-214ENST00000601319 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
HERC3-214ENST00000601319 TYMSOSQ8TAI1 123 aa10.12□□□□□ -0.79
HERC3-214ENST00000601319 S100A12P80511 92 aa10.11□□□□□ -0.79
HERC3-214ENST00000601319 KRTAP13-2Q52LG2 175 aa10.11□□□□□ -0.79
HERC3-214ENST00000601319 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
HERC3-214ENST00000601319 ANAPC11Q9NYG5 84 aa10.11□□□□□ -0.79
HERC3-214ENST00000601319 TIMM17BO60830 172 aa10.09□□□□□ -0.79
HERC3-214ENST00000601319 ADAMTSL4-AS1Q5T5F5 129 aa10.09□□□□□ -0.79
HERC3-214ENST00000601319 DDTP30046 118 aa10.08□□□□□ -0.8
HERC3-214ENST00000601319 KRTDAPP60985 99 aa10.08□□□□□ -0.8
HERC3-214ENST00000601319 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
HERC3-214ENST00000601319 ZNF706Q9Y5V0 76 aaPredicted RBP10.08□□□□□ -0.8
HERC3-214ENST00000601319 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
HERC3-214ENST00000601319 S100A1P23297 94 aa10.07□□□□□ -0.8
HERC3-214ENST00000601319 SPRR4Q96PI1 79 aa10.07□□□□□ -0.8
HERC3-214ENST00000601319 LITAFQ99732 161 aa10.07□□□□□ -0.8
HERC3-214ENST00000601319 C20orf202A1L168 122 aa10.06□□□□□ -0.8
HERC3-214ENST00000601319 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
HERC3-214ENST00000601319 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
HERC3-214ENST00000601319 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
HERC3-214ENST00000601319 AKR1D1P51857 326 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms