RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 FAM19A5Q7Z5A7 132 aaPredicted RBP5.35□□□□□ -1.55
SSBP4-208ENST00000600628 XAGE1AQ9HD64 81 aa5.35□□□□□ -1.55
SSBP4-208ENST00000600628 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
SSBP4-208ENST00000600628 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 COX17Q14061 63 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 REG3GQ6UW15 175 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 C22orf24Q9Y442 160 aa5.34□□□□□ -1.55
SSBP4-208ENST00000600628 C20orf202A1L168 122 aa5.33□□□□□ -1.56
SSBP4-208ENST00000600628 LEPROTL1O95214 131 aa5.33□□□□□ -1.56
SSBP4-208ENST00000600628 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
SSBP4-208ENST00000600628 PRO1933Q9H354 126 aa5.33□□□□□ -1.56
SSBP4-208ENST00000600628 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 KRTDAPP60985 99 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 TMEM170BQ5T4T1 132 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 Q8NDZ9 215 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 C14orf144Q96I85 54 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 ERG28Q9UKR5 140 aa5.32□□□□□ -1.56
SSBP4-208ENST00000600628 VPREB1P12018 145 aa5.31□□□□□ -1.56
SSBP4-208ENST00000600628 MRPL55Q7Z7F7 128 aaKnown RBP5.31□□□□□ -1.56
SSBP4-208ENST00000600628 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
SSBP4-208ENST00000600628 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
SSBP4-208ENST00000600628 SND1-IT1Q9HBX3 110 aa5.31□□□□□ -1.56
SSBP4-208ENST00000600628 LRP2P98164 4655 aa5.31□□□□□ -1.56
SSBP4-208ENST00000600628 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 H0Y9J4 135 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 M0R143 59 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 UBE2BP63146 152 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 LINC00167Q96N53 147 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 HSPB8Q9UJY1 196 aa5.3□□□□□ -1.56
SSBP4-208ENST00000600628 ZNF861PO60384 105 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 C3orf79P0CE67 100 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 PLNP26678 52 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 TSPEAR-AS2P59090 65 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 DIRC1Q969H9 104 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 UQCR10Q9UDW1 63 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
SSBP4-208ENST00000600628 PFN2P35080 140 aa5.28□□□□□ -1.56
SSBP4-208ENST00000600628 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
SSBP4-208ENST00000600628 MAP1LC3CQ9BXW4 147 aa5.28□□□□□ -1.56
SSBP4-208ENST00000600628 PAM16Q9Y3D7 125 aa5.28□□□□□ -1.56
SSBP4-208ENST00000600628 IGLV1-50A0A075B6I6 118 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 LEPROTO15243 131 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 BCE1O60756 84 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 DPM2O94777 84 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 HERV-K104P63124 156 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 SPATA45Q537H7 98 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 LINC01545Q5VT33 79 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 NDUFA12Q9UI09 145 aa5.27□□□□□ -1.57
SSBP4-208ENST00000600628 SYS1-DBNDD2H3BUS1 97 aa5.26□□□□□ -1.57
SSBP4-208ENST00000600628 IGKCP01834 107 aa5.26□□□□□ -1.57
SSBP4-208ENST00000600628 RPL37AP8A6NKH3 93 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 J3QQQ9 107 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 SMIM13P0DJ93 91 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 NMUP48645 174 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 PLEKHB2Q96CS7 222 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 PMCHL2Q9BQD1 86 aa5.25□□□□□ -1.57
SSBP4-208ENST00000600628 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
SSBP4-208ENST00000600628 E9PLD3 99 aa5.24□□□□□ -1.57
SSBP4-208ENST00000600628 M0R378 163 aa5.24□□□□□ -1.57
SSBP4-208ENST00000600628 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
SSBP4-208ENST00000600628 KRTAP4-16G5E9R7 235 aaPredicted RBP5.23□□□□□ -1.57
SSBP4-208ENST00000600628 H0Y8G0 127 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 SPRR1AP35321 89 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 LINC00158P58513 81 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 COL5A1-AS1Q5SY13 56 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 SNHG12Q9BXW3 62 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 LPAP08519 4548 aa5.23□□□□□ -1.57
SSBP4-208ENST00000600628 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
SSBP4-208ENST00000600628 A0A1B0GV90 55 aa5.22□□□□□ -1.57
SSBP4-208ENST00000600628 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
SSBP4-208ENST00000600628 RPL28P46779 137 aaKnown RBP5.22□□□□□ -1.57
SSBP4-208ENST00000600628 LITAFQ99732 161 aa5.22□□□□□ -1.57
SSBP4-208ENST00000600628 KCNQ1DNQ9H478 68 aa5.22□□□□□ -1.57
SSBP4-208ENST00000600628 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
SSBP4-208ENST00000600628 TMEM238C9JI98 176 aa5.21□□□□□ -1.58
SSBP4-208ENST00000600628 EIF4EBP3O60516 100 aaPredicted RBP5.21□□□□□ -1.58
SSBP4-208ENST00000600628 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
SSBP4-208ENST00000600628 HERVK_113P61574 105 aa5.21□□□□□ -1.58
SSBP4-208ENST00000600628 SLC25A34Q6PIV7 304 aa5.21□□□□□ -1.58
SSBP4-208ENST00000600628 A0A087X002 238 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 A0A0J9YXY3 114 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 TRBV10-2A0A0K0K1G8 114 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 SOSTDC1Q6X4U4 206 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 ATOH7Q8N100 152 aa5.2□□□□□ -1.58
SSBP4-208ENST00000600628 NDUFC2O95298 119 aa5.19□□□□□ -1.58
SSBP4-208ENST00000600628 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
SSBP4-208ENST00000600628 BOD1L2Q8IYS8 172 aa5.19□□□□□ -1.58
SSBP4-208ENST00000600628 PRYO14603 147 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 TIMM17BO60830 172 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 RPL13AP40429 203 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms