RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 KRTAP10-8P60410 259 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 Q8NDZ9 215 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 DIRC1Q969H9 104 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 MAP1LC3CQ9BXW4 147 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 TSPEAR-AS2P59090 65 aa13.82□□□□□ -0.2
IRF3-220ENST00000598108 VPREB1P12018 145 aa13.81□□□□□ -0.2
IRF3-220ENST00000598108 NKAPP1Q8N9T2 125 aa13.81□□□□□ -0.2
IRF3-220ENST00000598108 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
IRF3-220ENST00000598108 HMCN2Q8NDA2 5059 aa13.8□□□□□ -0.2
IRF3-220ENST00000598108 H0Y9J4 135 aa13.8□□□□□ -0.2
IRF3-220ENST00000598108 IGKCP01834 107 aa13.8□□□□□ -0.2
IRF3-220ENST00000598108 SMIM13P0DJ93 91 aa13.8□□□□□ -0.2
IRF3-220ENST00000598108 LEPROTO15243 131 aa13.79□□□□□ -0.2
IRF3-220ENST00000598108 SYS1-DBNDD2H3BUS1 97 aa13.77□□□□□ -0.21
IRF3-220ENST00000598108 ZNF861PO60384 105 aa13.77□□□□□ -0.21
IRF3-220ENST00000598108 HERV-K104P63124 156 aa13.77□□□□□ -0.21
IRF3-220ENST00000598108 COA6Q5JTJ3 125 aaKnown RBP13.77□□□□□ -0.21
IRF3-220ENST00000598108 PLEKHB2Q96CS7 222 aa13.77□□□□□ -0.21
IRF3-220ENST00000598108 MYMXA0A1B0GTQ4 84 aa13.76□□□□□ -0.21
IRF3-220ENST00000598108 BCE1O60756 84 aa13.76□□□□□ -0.21
IRF3-220ENST00000598108 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
IRF3-220ENST00000598108 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
IRF3-220ENST00000598108 J3QQQ9 107 aa13.74□□□□□ -0.21
IRF3-220ENST00000598108 IGKV2-28A0A075B6P5 120 aa13.73□□□□□ -0.21
IRF3-220ENST00000598108 IGKV2D-28P01615 120 aa13.73□□□□□ -0.21
IRF3-220ENST00000598108 KRTAP1-4P0C5Y4 121 aa13.73□□□□□ -0.21
IRF3-220ENST00000598108 HERVK_113P61574 105 aa13.73□□□□□ -0.21
IRF3-220ENST00000598108 MIR7-3HGQ8N6C7 128 aa13.73□□□□□ -0.21
IRF3-220ENST00000598108 IGLV1-50A0A075B6I6 118 aa13.72□□□□□ -0.21
IRF3-220ENST00000598108 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
IRF3-220ENST00000598108 LINC01545Q5VT33 79 aa13.71□□□□□ -0.21
IRF3-220ENST00000598108 S100A1P23297 94 aa13.7□□□□□ -0.22
IRF3-220ENST00000598108 PRR26Q8N8Z3 221 aa13.7□□□□□ -0.22
IRF3-220ENST00000598108 LINC00587B1AMM8 73 aa13.69□□□□□ -0.22
IRF3-220ENST00000598108 C3orf79P0CE67 100 aa13.69□□□□□ -0.22
IRF3-220ENST00000598108 PET117Q6UWS5 81 aa13.69□□□□□ -0.22
IRF3-220ENST00000598108 TMEM238C9JI98 176 aa13.68□□□□□ -0.22
IRF3-220ENST00000598108 LGALS3P17931 250 aaKnown RBP13.68□□□□□ -0.22
IRF3-220ENST00000598108 RPL28P46779 137 aaKnown RBP13.68□□□□□ -0.22
IRF3-220ENST00000598108 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
IRF3-220ENST00000598108 E9PLD3 99 aa13.67□□□□□ -0.22
IRF3-220ENST00000598108 KRTAP13-1Q8IUC0 172 aa13.67□□□□□ -0.22
IRF3-220ENST00000598108 DAND5Q8N907 189 aa13.67□□□□□ -0.22
IRF3-220ENST00000598108 NMUP48645 174 aa13.66□□□□□ -0.22
IRF3-220ENST00000598108 TMEM126AQ9H061 195 aa13.65□□□□□ -0.22
IRF3-220ENST00000598108 M0R378 163 aa13.64□□□□□ -0.23
IRF3-220ENST00000598108 KRTDAPP60985 99 aa13.64□□□□□ -0.23
IRF3-220ENST00000598108 UBE2AP49459 152 aa13.63□□□□□ -0.23
IRF3-220ENST00000598108 LOC107984156A0A0G2JMH3 177 aa13.61□□□□□ -0.23
IRF3-220ENST00000598108 NCR3O14931 201 aa13.61□□□□□ -0.23
IRF3-220ENST00000598108 ARL17AQ8IVW1 177 aa13.61□□□□□ -0.23
IRF3-220ENST00000598108 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
IRF3-220ENST00000598108 PRLHP81277 87 aa13.6□□□□□ -0.23
IRF3-220ENST00000598108 ADAMTSL4-AS1Q5T5F5 129 aa13.59□□□□□ -0.23
IRF3-220ENST00000598108 FAM19A1Q7Z5A9 133 aa13.59□□□□□ -0.23
IRF3-220ENST00000598108 IGKV2D-26A0A0A0MRZ7 120 aa13.58□□□□□ -0.24
IRF3-220ENST00000598108 EIF4EBP3O60516 100 aaPredicted RBP13.57□□□□□ -0.24
IRF3-220ENST00000598108 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
IRF3-220ENST00000598108 TTTY13Q9BZ97 58 aa13.55□□□□□ -0.24
IRF3-220ENST00000598108 ANAPC11Q9NYG5 84 aa13.55□□□□□ -0.24
IRF3-220ENST00000598108 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
IRF3-220ENST00000598108 KCNQ1DNQ9H478 68 aa13.53□□□□□ -0.24
IRF3-220ENST00000598108 A0A087X002 238 aa13.52□□□□□ -0.25
IRF3-220ENST00000598108 NPC2P61916 151 aa13.52□□□□□ -0.25
IRF3-220ENST00000598108 HIST3H2BBQ8N257 126 aa13.52□□□□□ -0.25
IRF3-220ENST00000598108 LITAFQ99732 161 aa13.52□□□□□ -0.25
IRF3-220ENST00000598108 C20orf202A1L168 122 aa13.51□□□□□ -0.25
IRF3-220ENST00000598108 RPL13AP40429 203 aaKnown RBP13.51□□□□□ -0.25
IRF3-220ENST00000598108 ATOH7Q8N100 152 aa13.51□□□□□ -0.25
IRF3-220ENST00000598108 ZNF815PA8K554 130 aa13.5□□□□□ -0.25
IRF3-220ENST00000598108 PRYO14603 147 aa13.5□□□□□ -0.25
IRF3-220ENST00000598108 SPRR1AP35321 89 aa13.5□□□□□ -0.25
IRF3-220ENST00000598108 MIEN1Q9BRT3 115 aa13.5□□□□□ -0.25
IRF3-220ENST00000598108 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
IRF3-220ENST00000598108 ANKRD39Q53RE8 183 aa13.49□□□□□ -0.25
IRF3-220ENST00000598108 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
IRF3-220ENST00000598108 NDUFC2O95298 119 aa13.48□□□□□ -0.25
IRF3-220ENST00000598108 SPANXB1Q9NS25 103 aaPredicted RBP13.48□□□□□ -0.25
IRF3-220ENST00000598108 KRTAP4-16G5E9R7 235 aaPredicted RBP13.47□□□□□ -0.25
IRF3-220ENST00000598108 TIMM17BO60830 172 aa13.46□□□□□ -0.25
IRF3-220ENST00000598108 CRYGAP11844 174 aa13.46□□□□□ -0.25
IRF3-220ENST00000598108 DDTP30046 118 aa13.46□□□□□ -0.25
IRF3-220ENST00000598108 LINC00337Q8N6G1 96 aa13.46□□□□□ -0.25
IRF3-220ENST00000598108 HIGD2AQ9BW72 106 aa13.46□□□□□ -0.25
IRF3-220ENST00000598108 S100A2P29034 98 aa13.44□□□□□ -0.26
IRF3-220ENST00000598108 KRTAP13-2Q52LG2 175 aa13.44□□□□□ -0.26
IRF3-220ENST00000598108 LINC00308Q8TCZ7 52 aa13.44□□□□□ -0.26
IRF3-220ENST00000598108 UBR4Q5T4S7 5183 aa13.44□□□□□ -0.26
IRF3-220ENST00000598108 IGLV6-57P01721 117 aa13.43□□□□□ -0.26
IRF3-220ENST00000598108 ETDCA0A1B0GVM5 59 aa13.41□□□□□ -0.26
IRF3-220ENST00000598108 S100A6P06703 90 aa13.41□□□□□ -0.26
IRF3-220ENST00000598108 FAM229BQ4G0N7 80 aa13.41□□□□□ -0.26
IRF3-220ENST00000598108 TYMSOSQ8TAI1 123 aa13.41□□□□□ -0.26
IRF3-220ENST00000598108 LRP2P98164 4655 aa13.41□□□□□ -0.26
IRF3-220ENST00000598108 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
IRF3-220ENST00000598108 PCP2Q8IVA1 136 aa13.4□□□□□ -0.26
IRF3-220ENST00000598108 B5MCH6 92 aa13.39□□□□□ -0.27
IRF3-220ENST00000598108 SNRPEP62304 92 aaKnown RBP13.39□□□□□ -0.27
IRF3-220ENST00000598108 AKR1D1P51857 326 aa13.38□□□□□ -0.27
IRF3-220ENST00000598108 S100A12P80511 92 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms