RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
APOC1-208ENST00000592535 ZNF861PO60384 105 aa8.34□□□□□ -1.07
APOC1-208ENST00000592535 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
APOC1-208ENST00000592535 LINC00167Q96N53 147 aa8.34□□□□□ -1.07
APOC1-208ENST00000592535 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
APOC1-208ENST00000592535 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
APOC1-208ENST00000592535 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
APOC1-208ENST00000592535 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
APOC1-208ENST00000592535 PFN2P35080 140 aa8.33□□□□□ -1.08
APOC1-208ENST00000592535 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
APOC1-208ENST00000592535 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
APOC1-208ENST00000592535 KRTDAPP60985 99 aa8.32□□□□□ -1.08
APOC1-208ENST00000592535 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
APOC1-208ENST00000592535 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
APOC1-208ENST00000592535 BCE1O60756 84 aa8.31□□□□□ -1.08
APOC1-208ENST00000592535 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
APOC1-208ENST00000592535 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
APOC1-208ENST00000592535 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
APOC1-208ENST00000592535 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
APOC1-208ENST00000592535 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
APOC1-208ENST00000592535 LRP2P98164 4655 aa8.29□□□□□ -1.08
APOC1-208ENST00000592535 RPL28P46779 137 aaKnown RBP8.29□□□□□ -1.08
APOC1-208ENST00000592535 PYY3Q5JQD4 70 aa8.28□□□□□ -1.08
APOC1-208ENST00000592535 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
APOC1-208ENST00000592535 VPREB1P12018 145 aa8.27□□□□□ -1.09
APOC1-208ENST00000592535 AKR1D1P51857 326 aa8.27□□□□□ -1.09
APOC1-208ENST00000592535 COX17Q14061 63 aa8.27□□□□□ -1.09
APOC1-208ENST00000592535 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
APOC1-208ENST00000592535 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
APOC1-208ENST00000592535 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
APOC1-208ENST00000592535 SFTA2Q6UW10 78 aa8.26□□□□□ -1.09
APOC1-208ENST00000592535 Q8NDZ9 215 aa8.26□□□□□ -1.09
APOC1-208ENST00000592535 PMCHL2Q9BQD1 86 aa8.26□□□□□ -1.09
APOC1-208ENST00000592535 H0Y8G0 127 aa8.25□□□□□ -1.09
APOC1-208ENST00000592535 DPM2O94777 84 aa8.25□□□□□ -1.09
APOC1-208ENST00000592535 SCGB1D1O95968 90 aa8.25□□□□□ -1.09
APOC1-208ENST00000592535 KRTAP13-1Q8IUC0 172 aa8.25□□□□□ -1.09
APOC1-208ENST00000592535 C20orf202A1L168 122 aa8.24□□□□□ -1.09
APOC1-208ENST00000592535 UBE2AP49459 152 aa8.24□□□□□ -1.09
APOC1-208ENST00000592535 LINC00158P58513 81 aa8.24□□□□□ -1.09
APOC1-208ENST00000592535 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
APOC1-208ENST00000592535 A0A087X002 238 aa8.23□□□□□ -1.09
APOC1-208ENST00000592535 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
APOC1-208ENST00000592535 IGKCP01834 107 aa8.23□□□□□ -1.09
APOC1-208ENST00000592535 PLNP26678 52 aa8.23□□□□□ -1.09
APOC1-208ENST00000592535 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
APOC1-208ENST00000592535 PRLHP81277 87 aa8.21□□□□□ -1.1
APOC1-208ENST00000592535 TMEM126AQ9H061 195 aa8.21□□□□□ -1.1
APOC1-208ENST00000592535 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
APOC1-208ENST00000592535 SMIM6P0DI80 62 aa8.2□□□□□ -1.1
APOC1-208ENST00000592535 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
APOC1-208ENST00000592535 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
APOC1-208ENST00000592535 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
APOC1-208ENST00000592535 M0R378 163 aa8.19□□□□□ -1.1
APOC1-208ENST00000592535 CRYGAP11844 174 aa8.19□□□□□ -1.1
APOC1-208ENST00000592535 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
APOC1-208ENST00000592535 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
APOC1-208ENST00000592535 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
APOC1-208ENST00000592535 HERV-K104P63124 156 aa8.17□□□□□ -1.1
APOC1-208ENST00000592535 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
APOC1-208ENST00000592535 MIR7-3HGQ8N6C7 128 aa8.17□□□□□ -1.1
APOC1-208ENST00000592535 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
APOC1-208ENST00000592535 LPAP08519 4548 aa8.17□□□□□ -1.1
APOC1-208ENST00000592535 TSPAN13O95857 204 aa8.16□□□□□ -1.1
APOC1-208ENST00000592535 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
APOC1-208ENST00000592535 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
APOC1-208ENST00000592535 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
APOC1-208ENST00000592535 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
APOC1-208ENST00000592535 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 E9PLD3 99 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 NCR3O14931 201 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 LEPROTO15243 131 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 PRR4Q16378 134 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 C12orf57Q99622 126 aa8.14□□□□□ -1.11
APOC1-208ENST00000592535 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
APOC1-208ENST00000592535 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
APOC1-208ENST00000592535 VAMP8Q9BV40 100 aa8.13□□□□□ -1.11
APOC1-208ENST00000592535 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
APOC1-208ENST00000592535 HSBP1L1C9JCN9 74 aa8.12□□□□□ -1.11
APOC1-208ENST00000592535 HERVK_113P61574 105 aa8.12□□□□□ -1.11
APOC1-208ENST00000592535 J3QQQ9 107 aa8.11□□□□□ -1.11
APOC1-208ENST00000592535 S100A12P80511 92 aa8.11□□□□□ -1.11
APOC1-208ENST00000592535 SPATA45Q537H7 98 aa8.11□□□□□ -1.11
APOC1-208ENST00000592535 DAND5Q8N907 189 aa8.11□□□□□ -1.11
APOC1-208ENST00000592535 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
APOC1-208ENST00000592535 PRYO14603 147 aa8.1□□□□□ -1.11
APOC1-208ENST00000592535 TRBV10-3A0A0K0K1G6 114 aa8.09□□□□□ -1.11
APOC1-208ENST00000592535 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
APOC1-208ENST00000592535 DLEU1O43261 78 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 COX8AP10176 69 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 SPRR1AP35321 89 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
APOC1-208ENST00000592535 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 NMUP48645 174 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms