RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TINCR	A0A1B0GVN0	87 aa		10.45	□□□□□ -0.74
CIRBP-238	ENST00000592412	ATP5L	O75964	103 aa		10.45	□□□□□ -0.74
CIRBP-238	ENST00000592412	CTAG1A	P78358	180 aa		10.45	□□□□□ -0.74
CIRBP-238	ENST00000592412	C3orf22	Q8N5N4	141 aa		10.45	□□□□□ -0.74
CIRBP-238	ENST00000592412	TMEM238	C9JI98	176 aa		10.43	□□□□□ -0.74
CIRBP-238	ENST00000592412	HSBP1	O75506	76 aa		10.43	□□□□□ -0.74
CIRBP-238	ENST00000592412	SPINK8	P0C7L1	97 aa		10.43	□□□□□ -0.74
CIRBP-238	ENST00000592412	PLEKHB2	Q96CS7	222 aa		10.42	□□□□□ -0.74
CIRBP-238	ENST00000592412	TMEM126A	Q9H061	195 aa		10.42	□□□□□ -0.74
CIRBP-238	ENST00000592412	VPREB1	P12018	145 aa		10.41	□□□□□ -0.74
CIRBP-238	ENST00000592412	FAM19A1	Q7Z5A9	133 aa		10.41	□□□□□ -0.74
CIRBP-238	ENST00000592412	FSIP2	Q5CZC0	6907 aa		10.41	□□□□□ -0.74
CIRBP-238	ENST00000592412		M0R378	163 aa		10.4	□□□□□ -0.74
CIRBP-238	ENST00000592412		Q8NDZ9	215 aa		10.4	□□□□□ -0.74
CIRBP-238	ENST00000592412	SERF1A	O75920	110 aa		10.39	□□□□□ -0.75
CIRBP-238	ENST00000592412	IGLC3	P0DOY3	106 aa		10.39	□□□□□ -0.75
CIRBP-238	ENST00000592412	FAM19A2	Q8N3H0	131 aa		10.39	□□□□□ -0.75
CIRBP-238	ENST00000592412	KRTAP4-1	Q9BYQ7	146 aa		10.39	□□□□□ -0.75
CIRBP-238	ENST00000592412		H3BRM9	83 aa		10.38	□□□□□ -0.75
CIRBP-238	ENST00000592412	IFI27L1	Q96BM0	104 aa		10.38	□□□□□ -0.75
CIRBP-238	ENST00000592412	ATP6V1G1	O75348	118 aa		10.37	□□□□□ -0.75
CIRBP-238	ENST00000592412	PFN2	P35080	140 aa		10.37	□□□□□ -0.75
CIRBP-238	ENST00000592412	LINC00310	P59036	64 aa		10.37	□□□□□ -0.75
CIRBP-238	ENST00000592412	KRTAP13-3	Q3SY46	172 aa		10.36	□□□□□ -0.75
CIRBP-238	ENST00000592412	LCE2D	Q5TA82	110 aa	Predicted RBP	10.36	□□□□□ -0.75
CIRBP-238	ENST00000592412	SND1-IT1	Q9HBX3	110 aa		10.36	□□□□□ -0.75
CIRBP-238	ENST00000592412	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.36	□□□□□ -0.75
CIRBP-238	ENST00000592412	IGLV5-39	A0A0G2JS06	123 aa		10.35	□□□□□ -0.75
CIRBP-238	ENST00000592412	ZNF22	P17026	224 aa	Predicted RBP	10.34	□□□□□ -0.75
CIRBP-238	ENST00000592412	ASB16-AS1	Q495Z4	193 aa		10.34	□□□□□ -0.75
CIRBP-238	ENST00000592412	FP248	Q71RG6	208 aa	Predicted RBP	10.34	□□□□□ -0.75
CIRBP-238	ENST00000592412	TRAV12-1	A0A0B4J245	112 aa		10.33	□□□□□ -0.76
CIRBP-238	ENST00000592412	C11orf86	A6NJI1	115 aa		10.33	□□□□□ -0.76
CIRBP-238	ENST00000592412	LEPROTL1	O95214	131 aa		10.33	□□□□□ -0.76
CIRBP-238	ENST00000592412	SPAG11A	Q6PDA7	123 aa		10.33	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BK	O60814	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BJ	P06899	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BO	P23527	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BB	P33778	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BD	P58876	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BC	P62807	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST2H2BE	Q16778	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	TMEM170B	Q5T4T1	132 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BH	Q93079	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	SPRR4	Q96PI1	79 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BN	Q99877	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIST1H2BM	Q99879	126 aa		10.32	□□□□□ -0.76
CIRBP-238	ENST00000592412	S100A1	P23297	94 aa		10.31	□□□□□ -0.76
CIRBP-238	ENST00000592412	HIGD2A	Q9BW72	106 aa		10.31	□□□□□ -0.76
CIRBP-238	ENST00000592412	HSPB8	Q9UJY1	196 aa		10.31	□□□□□ -0.76
CIRBP-238	ENST00000592412	ERG28	Q9UKR5	140 aa		10.31	□□□□□ -0.76
CIRBP-238	ENST00000592412		H0Y8G0	127 aa		10.3	□□□□□ -0.76
CIRBP-238	ENST00000592412	FABP4	P15090	132 aa		10.3	□□□□□ -0.76
CIRBP-238	ENST00000592412	RPL24	P83731	157 aa	Known RBP	10.29	□□□□□ -0.76
CIRBP-238	ENST00000592412	LINC01547	P58512	204 aa	Predicted RBP	10.28	□□□□□ -0.76
CIRBP-238	ENST00000592412	DAND5	Q8N907	189 aa		10.28	□□□□□ -0.76
CIRBP-238	ENST00000592412	ZNF625	Q96I27	306 aa	Predicted RBP	10.28	□□□□□ -0.76
CIRBP-238	ENST00000592412	COX17	Q14061	63 aa		10.27	□□□□□ -0.77
CIRBP-238	ENST00000592412	LINC00337	Q8N6G1	96 aa		10.27	□□□□□ -0.77
CIRBP-238	ENST00000592412	CRCT1	Q9UGL9	99 aa		10.27	□□□□□ -0.77
CIRBP-238	ENST00000592412		Q8NBF4	154 aa		10.26	□□□□□ -0.77
CIRBP-238	ENST00000592412	TMEM223	A0PJW6	202 aa		10.24	□□□□□ -0.77
CIRBP-238	ENST00000592412	MAP1LC3C	Q9BXW4	147 aa		10.24	□□□□□ -0.77
CIRBP-238	ENST00000592412	PLN	P26678	52 aa		10.22	□□□□□ -0.77
CIRBP-238	ENST00000592412	C4orf48	Q5BLP8	95 aa		10.22	□□□□□ -0.77
CIRBP-238	ENST00000592412	LCE2C	Q5TA81	110 aa		10.21	□□□□□ -0.77
CIRBP-238	ENST00000592412	SFTA2	Q6UW10	78 aa		10.21	□□□□□ -0.77
CIRBP-238	ENST00000592412	DPM2	O94777	84 aa		10.2	□□□□□ -0.78
CIRBP-238	ENST00000592412	SEC61B	P60468	96 aa	Known RBP	10.2	□□□□□ -0.78
CIRBP-238	ENST00000592412	COA6	Q5JTJ3	125 aa	Known RBP	10.2	□□□□□ -0.78
CIRBP-238	ENST00000592412	PMCHL2	Q9BQD1	86 aa		10.2	□□□□□ -0.78
CIRBP-238	ENST00000592412	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.2	□□□□□ -0.78
CIRBP-238	ENST00000592412	SPINK1	P00995	79 aa		10.19	□□□□□ -0.78
CIRBP-238	ENST00000592412	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-238	ENST00000592412	SPRR1A	P35321	89 aa		10.18	□□□□□ -0.78
CIRBP-238	ENST00000592412	IGKC	P01834	107 aa		10.17	□□□□□ -0.78
CIRBP-238	ENST00000592412	LINC00483	Q53H64	154 aa		10.17	□□□□□ -0.78
CIRBP-238	ENST00000592412	SMCR5	Q8TEV8	140 aa		10.17	□□□□□ -0.78
CIRBP-238	ENST00000592412		A0A0U1RRA0	63 aa		10.16	□□□□□ -0.78
CIRBP-238	ENST00000592412	SYS1-DBNDD2	H3BUS1	97 aa		10.16	□□□□□ -0.78
CIRBP-238	ENST00000592412	PRY	O14603	147 aa		10.16	□□□□□ -0.78
CIRBP-238	ENST00000592412		Q8N377	158 aa		10.16	□□□□□ -0.78
CIRBP-238	ENST00000592412	LINC00158	P58513	81 aa		10.15	□□□□□ -0.78
CIRBP-238	ENST00000592412	HERVK_113	P61574	105 aa		10.15	□□□□□ -0.78
CIRBP-238	ENST00000592412	KRTAP19-2	Q3LHN2	52 aa		10.15	□□□□□ -0.78
CIRBP-238	ENST00000592412	XP32	Q5T750	250 aa		10.14	□□□□□ -0.79
CIRBP-238	ENST00000592412	KCNQ1DN	Q9H478	68 aa		10.14	□□□□□ -0.79
CIRBP-238	ENST00000592412	LEPROT	O15243	131 aa		10.13	□□□□□ -0.79
CIRBP-238	ENST00000592412	PET117	Q6UWS5	81 aa		10.13	□□□□□ -0.79
CIRBP-238	ENST00000592412	NDUFA12	Q9UI09	145 aa		10.13	□□□□□ -0.79
CIRBP-238	ENST00000592412	MYMX	A0A1B0GTQ4	84 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	NCR3	O14931	201 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	C3orf79	P0CE67	100 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	TSPEAR-AS2	P59090	65 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	RPS29	P62273	56 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	HERV-K104	P63124	156 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	MEIG1	Q5JSS6	88 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412	LINC01545	Q5VT33	79 aa		10.11	□□□□□ -0.79
CIRBP-238	ENST00000592412		J3QQQ9	107 aa		10.1	□□□□□ -0.79

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