RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 IGKV2-28A0A075B6P5 120 aa16.32■□□□□ 0.2
SMAD4-213ENST00000591914 IGKV2D-28P01615 120 aa16.32■□□□□ 0.2
SMAD4-213ENST00000591914 HERV-K104P63124 156 aa16.31■□□□□ 0.2
SMAD4-213ENST00000591914 A0A0U1RRA0 63 aa16.29■□□□□ 0.2
SMAD4-213ENST00000591914 KRTAP13-1Q8IUC0 172 aa16.29■□□□□ 0.2
SMAD4-213ENST00000591914 NDUFA12Q9UI09 145 aa16.29■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BKO60814 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 DPM2O94777 84 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BJP06899 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 SMIM13P0DJ93 91 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BOP23527 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BBP33778 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BDP58876 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BCP62807 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST2H2BEQ16778 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BHQ93079 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BNQ99877 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 HIST1H2BMQ99879 126 aa16.28■□□□□ 0.2
SMAD4-213ENST00000591914 PMCHL2Q9BQD1 86 aa16.27■□□□□ 0.2
SMAD4-213ENST00000591914 UBR4Q5T4S7 5183 aa16.27■□□□□ 0.19
SMAD4-213ENST00000591914 MYMXA0A1B0GTQ4 84 aa16.26■□□□□ 0.19
SMAD4-213ENST00000591914 TSPEAR-AS2P59090 65 aa16.26■□□□□ 0.19
SMAD4-213ENST00000591914 MEIG1Q5JSS6 88 aa16.26■□□□□ 0.19
SMAD4-213ENST00000591914 LEPROTO15243 131 aa16.25■□□□□ 0.19
SMAD4-213ENST00000591914 MAP1LC3CQ9BXW4 147 aa16.25■□□□□ 0.19
SMAD4-213ENST00000591914 LINC00587B1AMM8 73 aa16.24■□□□□ 0.19
SMAD4-213ENST00000591914 IGKCP01834 107 aa16.24■□□□□ 0.19
SMAD4-213ENST00000591914 RPL13AP40429 203 aaKnown RBP16.24■□□□□ 0.19
SMAD4-213ENST00000591914 PLEKHB2Q96CS7 222 aa16.24■□□□□ 0.19
SMAD4-213ENST00000591914 ATP6V1G1O75348 118 aa16.23■□□□□ 0.19
SMAD4-213ENST00000591914 UBE2AP49459 152 aa16.23■□□□□ 0.19
SMAD4-213ENST00000591914 MIR7-3HGQ8N6C7 128 aa16.23■□□□□ 0.19
SMAD4-213ENST00000591914 TMEM126AQ9H061 195 aa16.23■□□□□ 0.19
SMAD4-213ENST00000591914 TMEM238C9JI98 176 aa16.22■□□□□ 0.19
SMAD4-213ENST00000591914 HERVK_113P61574 105 aa16.21■□□□□ 0.19
SMAD4-213ENST00000591914 J3QQQ9 107 aa16.2■□□□□ 0.18
SMAD4-213ENST00000591914 M0R378 163 aa16.2■□□□□ 0.18
SMAD4-213ENST00000591914 BOD1L2Q8IYS8 172 aa16.18■□□□□ 0.18
SMAD4-213ENST00000591914 LRP2P98164 4655 aa16.17■□□□□ 0.18
SMAD4-213ENST00000591914 NMUP48645 174 aa16.16■□□□□ 0.18
SMAD4-213ENST00000591914 PRLHP81277 87 aa16.16■□□□□ 0.18
SMAD4-213ENST00000591914 FAM19A1Q7Z5A9 133 aa16.16■□□□□ 0.18
SMAD4-213ENST00000591914 SYS1-DBNDD2H3BUS1 97 aa16.15■□□□□ 0.18
SMAD4-213ENST00000591914 A0A087X002 238 aa16.14■□□□□ 0.17
SMAD4-213ENST00000591914 LGALS3P17931 250 aaKnown RBP16.13■□□□□ 0.17
SMAD4-213ENST00000591914 IGKV2D-26A0A0A0MRZ7 120 aa16.12■□□□□ 0.17
SMAD4-213ENST00000591914 LOC107984156A0A0G2JMH3 177 aa16.12■□□□□ 0.17
SMAD4-213ENST00000591914 ARL17AQ8IVW1 177 aa16.12■□□□□ 0.17
SMAD4-213ENST00000591914 CRYGAP11844 174 aa16.11■□□□□ 0.17
SMAD4-213ENST00000591914 E9PLD3 99 aa16.1■□□□□ 0.17
SMAD4-213ENST00000591914 NCR3O14931 201 aa16.1■□□□□ 0.17
SMAD4-213ENST00000591914 COA6Q5JTJ3 125 aaKnown RBP16.1■□□□□ 0.17
SMAD4-213ENST00000591914 DAND5Q8N907 189 aa16.1■□□□□ 0.17
SMAD4-213ENST00000591914 LINC01545Q5VT33 79 aa16.09■□□□□ 0.17
SMAD4-213ENST00000591914 ANAPC11Q9NYG5 84 aa16.09■□□□□ 0.17
SMAD4-213ENST00000591914 PET117Q6UWS5 81 aa16.07■□□□□ 0.16
SMAD4-213ENST00000591914 PRYO14603 147 aa16.06■□□□□ 0.16
SMAD4-213ENST00000591914 FAM229BQ4G0N7 80 aa16.06■□□□□ 0.16
SMAD4-213ENST00000591914 KCNQ1DNQ9H478 68 aa16.06■□□□□ 0.16
SMAD4-213ENST00000591914 TYMSOSQ8TAI1 123 aa16.04■□□□□ 0.16
SMAD4-213ENST00000591914 SPRR1AP35321 89 aa16.03■□□□□ 0.16
SMAD4-213ENST00000591914 KRTAP13-2Q52LG2 175 aa16.03■□□□□ 0.16
SMAD4-213ENST00000591914 A0A0J9YXY3 114 aa16.02■□□□□ 0.16
SMAD4-213ENST00000591914 TRBV10-3A0A0K0K1G6 114 aa16.02■□□□□ 0.16
SMAD4-213ENST00000591914 C3orf79P0CE67 100 aa16.02■□□□□ 0.16
SMAD4-213ENST00000591914 LINC00337Q8N6G1 96 aa16.01■□□□□ 0.15
SMAD4-213ENST00000591914 HIGD2AQ9BW72 106 aa16.01■□□□□ 0.15
SMAD4-213ENST00000591914 TRBV10-2A0A0K0K1G8 114 aa16■□□□□ 0.15
SMAD4-213ENST00000591914 MIEN1Q9BRT3 115 aa16■□□□□ 0.15
SMAD4-213ENST00000591914 KRTAP4-16G5E9R7 235 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-213ENST00000591914 ADAMTSL4-AS1Q5T5F5 129 aa15.98■□□□□ 0.15
SMAD4-213ENST00000591914 SPANXB1Q9NS25 103 aaPredicted RBP15.98■□□□□ 0.15
SMAD4-213ENST00000591914 NDUFC2O95298 119 aa15.97■□□□□ 0.15
SMAD4-213ENST00000591914 SOSTDC1Q6X4U4 206 aa15.96■□□□□ 0.15
SMAD4-213ENST00000591914 KRTDAPP60985 99 aa15.95■□□□□ 0.14
SMAD4-213ENST00000591914 EIF4EBP3O60516 100 aaPredicted RBP15.94■□□□□ 0.14
SMAD4-213ENST00000591914 DDTP30046 118 aa15.94■□□□□ 0.14
SMAD4-213ENST00000591914 S100A12P80511 92 aa15.94■□□□□ 0.14
SMAD4-213ENST00000591914 ETDCA0A1B0GVM5 59 aa15.93■□□□□ 0.14
SMAD4-213ENST00000591914 LITAFQ99732 161 aa15.93■□□□□ 0.14
SMAD4-213ENST00000591914 TSPAN13O95857 204 aa15.92■□□□□ 0.14
SMAD4-213ENST00000591914 SPRR4Q96PI1 79 aa15.92■□□□□ 0.14
SMAD4-213ENST00000591914 LPAP08519 4548 aa15.91■□□□□ 0.14
SMAD4-213ENST00000591914 NPC2P61916 151 aa15.91■□□□□ 0.14
SMAD4-213ENST00000591914 TIMM17BO60830 172 aa15.9■□□□□ 0.14
SMAD4-213ENST00000591914 IGLV6-57P01721 117 aa15.9■□□□□ 0.14
SMAD4-213ENST00000591914 ZNF706Q9Y5V0 76 aaPredicted RBP15.89■□□□□ 0.13
SMAD4-213ENST00000591914 ZNF815PA8K554 130 aa15.88■□□□□ 0.13
SMAD4-213ENST00000591914 B5MCH6 92 aa15.87■□□□□ 0.13
SMAD4-213ENST00000591914 S100A1P23297 94 aa15.87■□□□□ 0.13
SMAD4-213ENST00000591914 S100A7L2Q5SY68 101 aa15.87■□□□□ 0.13
SMAD4-213ENST00000591914 SMCR5Q8TEV8 140 aa15.87■□□□□ 0.13
SMAD4-213ENST00000591914 TTTY13Q9BZ97 58 aa15.87■□□□□ 0.13
SMAD4-213ENST00000591914 C20orf202A1L168 122 aa15.86■□□□□ 0.13
SMAD4-213ENST00000591914 PRR4Q16378 134 aa15.86■□□□□ 0.13
SMAD4-213ENST00000591914 LINC00304Q8N9R0 145 aa15.86■□□□□ 0.13
SMAD4-213ENST00000591914 LINC00308Q8TCZ7 52 aa15.86■□□□□ 0.13
SMAD4-213ENST00000591914 C3orf22Q8N5N4 141 aa15.85■□□□□ 0.13
SMAD4-213ENST00000591914 RNF213Q63HN8 5207 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms