RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 LINC00587B1AMM8 73 aa6.19□□□□□ -1.42
BRCA1-227ENST00000591849 HERV-K104P63124 156 aa6.19□□□□□ -1.42
BRCA1-227ENST00000591849 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
BRCA1-227ENST00000591849 SND1-IT1Q9HBX3 110 aa6.19□□□□□ -1.42
BRCA1-227ENST00000591849 PLA2G2DQ9UNK4 145 aa6.19□□□□□ -1.42
BRCA1-227ENST00000591849 RPL37AP8A6NKH3 93 aa6.18□□□□□ -1.42
BRCA1-227ENST00000591849 LEPROTO15243 131 aa6.18□□□□□ -1.42
BRCA1-227ENST00000591849 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
BRCA1-227ENST00000591849 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
BRCA1-227ENST00000591849 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
BRCA1-227ENST00000591849 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
BRCA1-227ENST00000591849 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
BRCA1-227ENST00000591849 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
BRCA1-227ENST00000591849 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
BRCA1-227ENST00000591849 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
BRCA1-227ENST00000591849 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.42
BRCA1-227ENST00000591849 J3QQQ9 107 aa6.15□□□□□ -1.42
BRCA1-227ENST00000591849 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
BRCA1-227ENST00000591849 KRTDAPP60985 99 aa6.15□□□□□ -1.42
BRCA1-227ENST00000591849 PET117Q6UWS5 81 aa6.15□□□□□ -1.42
BRCA1-227ENST00000591849 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
BRCA1-227ENST00000591849 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 C5orf52A6NGY3 159 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 H0Y9J4 135 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 ZNF861PO60384 105 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 BCE1O60756 84 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 NMUP48645 174 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 UBE2AP49459 152 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
BRCA1-227ENST00000591849 C20orf202A1L168 122 aa6.13□□□□□ -1.43
BRCA1-227ENST00000591849 VPREB1P12018 145 aa6.13□□□□□ -1.43
BRCA1-227ENST00000591849 S100A2P29034 98 aa6.13□□□□□ -1.43
BRCA1-227ENST00000591849 BOD1L2Q8IYS8 172 aa6.13□□□□□ -1.43
BRCA1-227ENST00000591849 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
BRCA1-227ENST00000591849 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
BRCA1-227ENST00000591849 SNRPEP62304 92 aaKnown RBP6.12□□□□□ -1.43
BRCA1-227ENST00000591849 MIEN1Q9BRT3 115 aa6.12□□□□□ -1.43
BRCA1-227ENST00000591849 E9PLD3 99 aa6.11□□□□□ -1.43
BRCA1-227ENST00000591849 M0R378 163 aa6.11□□□□□ -1.43
BRCA1-227ENST00000591849 C3orf79P0CE67 100 aa6.11□□□□□ -1.43
BRCA1-227ENST00000591849 S100A12P80511 92 aa6.11□□□□□ -1.43
BRCA1-227ENST00000591849 LINC01545Q5VT33 79 aa6.11□□□□□ -1.43
BRCA1-227ENST00000591849 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
BRCA1-227ENST00000591849 IGLV1-50A0A075B6I6 118 aa6.1□□□□□ -1.43
BRCA1-227ENST00000591849 NCR3O14931 201 aa6.1□□□□□ -1.43
BRCA1-227ENST00000591849 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
BRCA1-227ENST00000591849 DAND5Q8N907 189 aa6.1□□□□□ -1.43
BRCA1-227ENST00000591849 FAT3Q8TDW7 4589 aa6.09□□□□□ -1.43
BRCA1-227ENST00000591849 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
BRCA1-227ENST00000591849 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
BRCA1-227ENST00000591849 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.43
BRCA1-227ENST00000591849 LOC105371267A0A1B0GV96 52 aa6.08□□□□□ -1.44
BRCA1-227ENST00000591849 TMEM238C9JI98 176 aa6.08□□□□□ -1.44
BRCA1-227ENST00000591849 AKR1D1P51857 326 aa6.08□□□□□ -1.44
BRCA1-227ENST00000591849 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
BRCA1-227ENST00000591849 A0A0J9YXY3 114 aa6.07□□□□□ -1.44
BRCA1-227ENST00000591849 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
BRCA1-227ENST00000591849 NPC2P61916 151 aa6.07□□□□□ -1.44
BRCA1-227ENST00000591849 Q8NDZ9 215 aa6.07□□□□□ -1.44
BRCA1-227ENST00000591849 IGKV2D-26A0A0A0MRZ7 120 aa6.06□□□□□ -1.44
BRCA1-227ENST00000591849 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
BRCA1-227ENST00000591849 PRLHP81277 87 aa6.06□□□□□ -1.44
BRCA1-227ENST00000591849 S100A7L2Q5SY68 101 aa6.06□□□□□ -1.44
BRCA1-227ENST00000591849 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
BRCA1-227ENST00000591849 ETDCA0A1B0GVM5 59 aa6.05□□□□□ -1.44
BRCA1-227ENST00000591849 PRYO14603 147 aa6.05□□□□□ -1.44
BRCA1-227ENST00000591849 ATOH7Q8N100 152 aa6.05□□□□□ -1.44
BRCA1-227ENST00000591849 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 SMIM6P0DI80 62 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 CRYGAP11844 174 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 DDTP30046 118 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
BRCA1-227ENST00000591849 SPANXB1Q9NS25 103 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-227ENST00000591849 TRBV10-3A0A0K0K1G6 114 aa6.03□□□□□ -1.44
BRCA1-227ENST00000591849 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
BRCA1-227ENST00000591849 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
BRCA1-227ENST00000591849 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
BRCA1-227ENST00000591849 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 TIMM17BO60830 172 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 NDUFC2O95298 119 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 OR13C6PQ8NH95 151 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 TTTY13Q9BZ97 58 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 CBY1Q9Y3M2 126 aa6.02□□□□□ -1.45
BRCA1-227ENST00000591849 ANKRD39Q53RE8 183 aa6.01□□□□□ -1.45
BRCA1-227ENST00000591849 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
BRCA1-227ENST00000591849 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
BRCA1-227ENST00000591849 COPS9Q8WXC6 57 aa6.01□□□□□ -1.45
BRCA1-227ENST00000591849 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
BRCA1-227ENST00000591849 HINT1P49773 126 aaPredicted RBP6□□□□□ -1.45
BRCA1-227ENST00000591849 JOSD1Q15040 202 aaPredicted RBP6□□□□□ -1.45
BRCA1-227ENST00000591849 SOSTDC1Q6X4U4 206 aa6□□□□□ -1.45
BRCA1-227ENST00000591849 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
BRCA1-227ENST00000591849 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
BRCA1-227ENST00000591849 SCGB1D1O95968 90 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms