RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 ABCA13Q86UQ4 5058 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
MBD1-225ENST00000591535 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
MBD1-225ENST00000591535 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
MBD1-225ENST00000591535 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 MYMXA0A1B0GTQ4 84 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 J3QQQ9 107 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
MBD1-225ENST00000591535 KRTAP4-5Q9BYR2 181 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 VPS13BQ7Z7G8 4022 aa8.87□□□□□ -0.99
MBD1-225ENST00000591535 LINC00158P58513 81 aa8.86□□□□□ -0.99
MBD1-225ENST00000591535 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
MBD1-225ENST00000591535 COX17Q14061 63 aa8.86□□□□□ -0.99
MBD1-225ENST00000591535 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
MBD1-225ENST00000591535 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
MBD1-225ENST00000591535 RPL37AP61513 92 aaKnown RBP8.85□□□□□ -0.99
MBD1-225ENST00000591535 HERV-K104P63124 156 aa8.85□□□□□ -0.99
MBD1-225ENST00000591535 E9PLD3 99 aa8.84□□□□□ -0.99
MBD1-225ENST00000591535 PCLOQ9Y6V0 5065 aa8.84□□□□□ -0.99
MBD1-225ENST00000591535 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
MBD1-225ENST00000591535 SMIM13P0DJ93 91 aa8.83□□□□□ -1
MBD1-225ENST00000591535 NMUP48645 174 aa8.83□□□□□ -1
MBD1-225ENST00000591535 M0QXV9 152 aa8.81□□□□□ -1
MBD1-225ENST00000591535 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
MBD1-225ENST00000591535 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
MBD1-225ENST00000591535 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
MBD1-225ENST00000591535 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
MBD1-225ENST00000591535 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
MBD1-225ENST00000591535 UBE2BP63146 152 aa8.79□□□□□ -1
MBD1-225ENST00000591535 C22orf24Q9Y442 160 aa8.79□□□□□ -1
MBD1-225ENST00000591535 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
MBD1-225ENST00000591535 MIR7-3HGQ8N6C7 128 aa8.78□□□□□ -1
MBD1-225ENST00000591535 NKAPP1Q8N9T2 125 aa8.77□□□□□ -1.01
MBD1-225ENST00000591535 PLA2G2DQ9UNK4 145 aa8.77□□□□□ -1.01
MBD1-225ENST00000591535 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
MBD1-225ENST00000591535 VAMP8Q9BV40 100 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 A0A0J9YXY3 114 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
MBD1-225ENST00000591535 RPL24P83731 157 aaKnown RBP8.76□□□□□ -1.01
MBD1-225ENST00000591535 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
MBD1-225ENST00000591535 DAND5Q8N907 189 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 PAM16Q9Y3D7 125 aa8.76□□□□□ -1.01
MBD1-225ENST00000591535 VPS25Q9BRG1 176 aa8.75□□□□□ -1.01
MBD1-225ENST00000591535 TP73-AS1Q9UF72 201 aa8.75□□□□□ -1.01
MBD1-225ENST00000591535 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
MBD1-225ENST00000591535 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
MBD1-225ENST00000591535 UBE2V1Q13404 147 aa8.74□□□□□ -1.01
MBD1-225ENST00000591535 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
MBD1-225ENST00000591535 SCGB1A1P11684 91 aa8.73□□□□□ -1.01
MBD1-225ENST00000591535 SPATA45Q537H7 98 aa8.73□□□□□ -1.01
MBD1-225ENST00000591535 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
MBD1-225ENST00000591535 BOD1L2Q8IYS8 172 aa8.73□□□□□ -1.01
MBD1-225ENST00000591535 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 VPREB1P12018 145 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 SCGB1D4Q6XE38 83 aa8.72□□□□□ -1.01
MBD1-225ENST00000591535 NPC2P61916 151 aa8.71□□□□□ -1.02
MBD1-225ENST00000591535 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
MBD1-225ENST00000591535 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
MBD1-225ENST00000591535 Q8NDZ9 215 aa8.7□□□□□ -1.02
MBD1-225ENST00000591535 COX8AP10176 69 aa8.69□□□□□ -1.02
MBD1-225ENST00000591535 IGKV2-28A0A075B6P5 120 aa8.69□□□□□ -1.02
MBD1-225ENST00000591535 TIMM17BO60830 172 aa8.69□□□□□ -1.02
MBD1-225ENST00000591535 IGKV2D-28P01615 120 aa8.69□□□□□ -1.02
MBD1-225ENST00000591535 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
MBD1-225ENST00000591535 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
MBD1-225ENST00000591535 K7ERU9 68 aa8.68□□□□□ -1.02
MBD1-225ENST00000591535 NCR3O14931 201 aa8.68□□□□□ -1.02
MBD1-225ENST00000591535 A0A1B0GV72 72 aa8.67□□□□□ -1.02
MBD1-225ENST00000591535 M0R378 163 aa8.67□□□□□ -1.02
MBD1-225ENST00000591535 LOC107984156A0A0G2JMH3 177 aa8.66□□□□□ -1.02
MBD1-225ENST00000591535 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
MBD1-225ENST00000591535 ARL17AQ8IVW1 177 aa8.66□□□□□ -1.02
MBD1-225ENST00000591535 LITAFQ99732 161 aa8.66□□□□□ -1.02
MBD1-225ENST00000591535 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
MBD1-225ENST00000591535 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
MBD1-225ENST00000591535 SLC25A34Q6PIV7 304 aa8.65□□□□□ -1.02
MBD1-225ENST00000591535 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.03
MBD1-225ENST00000591535 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
MBD1-225ENST00000591535 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.03
MBD1-225ENST00000591535 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
MBD1-225ENST00000591535 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
MBD1-225ENST00000591535 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
MBD1-225ENST00000591535 BCE1O60756 84 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 NDUFC2O95298 119 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
MBD1-225ENST00000591535 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
MBD1-225ENST00000591535 FAT3Q8TDW7 4589 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 MTURNQ8N3F0 131 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
MBD1-225ENST00000591535 TRBV10-2A0A0K0K1G8 114 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms