RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 ATP6V1G1O75348 118 aa13.97□□□□□ -0.17
CLPTM1-212ENST00000591304 IGKV2-28A0A075B6P5 120 aa13.95□□□□□ -0.18
CLPTM1-212ENST00000591304 IGKV2D-28P01615 120 aa13.95□□□□□ -0.18
CLPTM1-212ENST00000591304 FABP4P15090 132 aa13.95□□□□□ -0.18
CLPTM1-212ENST00000591304 MYMXA0A1B0GTQ4 84 aa13.94□□□□□ -0.18
CLPTM1-212ENST00000591304 UBE2AP49459 152 aa13.94□□□□□ -0.18
CLPTM1-212ENST00000591304 MEIG1Q5JSS6 88 aa13.94□□□□□ -0.18
CLPTM1-212ENST00000591304 NDUFA12Q9UI09 145 aa13.94□□□□□ -0.18
CLPTM1-212ENST00000591304 SCO1O75880 301 aa13.93□□□□□ -0.18
CLPTM1-212ENST00000591304 DPM2O94777 84 aa13.93□□□□□ -0.18
CLPTM1-212ENST00000591304 MAP1LC3CQ9BXW4 147 aa13.93□□□□□ -0.18
CLPTM1-212ENST00000591304 HERVK_113P61574 105 aa13.92□□□□□ -0.18
CLPTM1-212ENST00000591304 PLEKHB2Q96CS7 222 aa13.92□□□□□ -0.18
CLPTM1-212ENST00000591304 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
CLPTM1-212ENST00000591304 LEPROTO15243 131 aa13.91□□□□□ -0.18
CLPTM1-212ENST00000591304 SMIM13P0DJ93 91 aa13.91□□□□□ -0.18
CLPTM1-212ENST00000591304 KRTAP13-1Q8IUC0 172 aa13.9□□□□□ -0.18
CLPTM1-212ENST00000591304 IGKCP01834 107 aa13.89□□□□□ -0.19
CLPTM1-212ENST00000591304 TMEM126AQ9H061 195 aa13.89□□□□□ -0.19
CLPTM1-212ENST00000591304 M0R378 163 aa13.88□□□□□ -0.19
CLPTM1-212ENST00000591304 MIR7-3HGQ8N6C7 128 aa13.87□□□□□ -0.19
CLPTM1-212ENST00000591304 Q8NDZ9 215 aa13.87□□□□□ -0.19
CLPTM1-212ENST00000591304 J3QQQ9 107 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BKO60814 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BJP06899 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BOP23527 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BBP33778 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 NMUP48645 174 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BDP58876 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BCP62807 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST2H2BEQ16778 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 FAM19A1Q7Z5A9 133 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BHQ93079 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BNQ99877 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 HIST1H2BMQ99879 126 aa13.86□□□□□ -0.19
CLPTM1-212ENST00000591304 CRYGAP11844 174 aa13.85□□□□□ -0.19
CLPTM1-212ENST00000591304 BOD1L2Q8IYS8 172 aa13.85□□□□□ -0.19
CLPTM1-212ENST00000591304 IGKV2D-26A0A0A0MRZ7 120 aa13.84□□□□□ -0.19
CLPTM1-212ENST00000591304 TMEM238C9JI98 176 aa13.84□□□□□ -0.19
CLPTM1-212ENST00000591304 LGALS3P17931 250 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-212ENST00000591304 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.2
CLPTM1-212ENST00000591304 TSPEAR-AS2P59090 65 aa13.82□□□□□ -0.2
CLPTM1-212ENST00000591304 UBR4Q5T4S7 5183 aa13.82□□□□□ -0.2
CLPTM1-212ENST00000591304 PRLHP81277 87 aa13.81□□□□□ -0.2
CLPTM1-212ENST00000591304 FAM229BQ4G0N7 80 aa13.8□□□□□ -0.2
CLPTM1-212ENST00000591304 LOC107984156A0A0G2JMH3 177 aa13.79□□□□□ -0.2
CLPTM1-212ENST00000591304 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
CLPTM1-212ENST00000591304 ARL17AQ8IVW1 177 aa13.79□□□□□ -0.2
CLPTM1-212ENST00000591304 A0A087X002 238 aa13.78□□□□□ -0.2
CLPTM1-212ENST00000591304 PRYO14603 147 aa13.78□□□□□ -0.2
CLPTM1-212ENST00000591304 S100A12P80511 92 aa13.78□□□□□ -0.2
CLPTM1-212ENST00000591304 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.21
CLPTM1-212ENST00000591304 E9PLD3 99 aa13.76□□□□□ -0.21
CLPTM1-212ENST00000591304 MIEN1Q9BRT3 115 aa13.76□□□□□ -0.21
CLPTM1-212ENST00000591304 NCR3O14931 201 aa13.75□□□□□ -0.21
CLPTM1-212ENST00000591304 PET117Q6UWS5 81 aa13.75□□□□□ -0.21
CLPTM1-212ENST00000591304 KCNQ1DNQ9H478 68 aa13.75□□□□□ -0.21
CLPTM1-212ENST00000591304 TRBV10-2A0A0K0K1G8 114 aa13.73□□□□□ -0.21
CLPTM1-212ENST00000591304 LINC00337Q8N6G1 96 aa13.73□□□□□ -0.21
CLPTM1-212ENST00000591304 COA6Q5JTJ3 125 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-212ENST00000591304 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
CLPTM1-212ENST00000591304 DAND5Q8N907 189 aa13.72□□□□□ -0.21
CLPTM1-212ENST00000591304 HIGD2AQ9BW72 106 aa13.72□□□□□ -0.21
CLPTM1-212ENST00000591304 LRP2P98164 4655 aa13.72□□□□□ -0.21
CLPTM1-212ENST00000591304 SPRR1AP35321 89 aa13.71□□□□□ -0.21
CLPTM1-212ENST00000591304 ANAPC11Q9NYG5 84 aa13.71□□□□□ -0.21
CLPTM1-212ENST00000591304 A0A0J9YXY3 114 aa13.69□□□□□ -0.22
CLPTM1-212ENST00000591304 TRBV10-3A0A0K0K1G6 114 aa13.69□□□□□ -0.22
CLPTM1-212ENST00000591304 NDUFC2O95298 119 aa13.69□□□□□ -0.22
CLPTM1-212ENST00000591304 SPANXB1Q9NS25 103 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-212ENST00000591304 ZNF706Q9Y5V0 76 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-212ENST00000591304 ETDCA0A1B0GVM5 59 aa13.68□□□□□ -0.22
CLPTM1-212ENST00000591304 KRTAP13-2Q52LG2 175 aa13.67□□□□□ -0.22
CLPTM1-212ENST00000591304 DDTP30046 118 aa13.66□□□□□ -0.22
CLPTM1-212ENST00000591304 C3orf79P0CE67 100 aa13.65□□□□□ -0.22
CLPTM1-212ENST00000591304 KRTAP4-16G5E9R7 235 aaPredicted RBP13.64□□□□□ -0.23
CLPTM1-212ENST00000591304 TSPAN13O95857 204 aa13.64□□□□□ -0.23
CLPTM1-212ENST00000591304 CTAG1AP78358 180 aa13.63□□□□□ -0.23
CLPTM1-212ENST00000591304 S100A7L2Q5SY68 101 aa13.63□□□□□ -0.23
CLPTM1-212ENST00000591304 SPRR4Q96PI1 79 aa13.63□□□□□ -0.23
CLPTM1-212ENST00000591304 KRTDAPP60985 99 aa13.62□□□□□ -0.23
CLPTM1-212ENST00000591304 PRR4Q16378 134 aa13.62□□□□□ -0.23
CLPTM1-212ENST00000591304 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
CLPTM1-212ENST00000591304 C20orf202A1L168 122 aa13.61□□□□□ -0.23
CLPTM1-212ENST00000591304 TIMM17BO60830 172 aa13.61□□□□□ -0.23
CLPTM1-212ENST00000591304 LINC00304Q8N9R0 145 aa13.61□□□□□ -0.23
CLPTM1-212ENST00000591304 AKR1D1P51857 326 aa13.6□□□□□ -0.23
CLPTM1-212ENST00000591304 CBY1Q9Y3M2 126 aa13.6□□□□□ -0.23
CLPTM1-212ENST00000591304 IGLV6-57P01721 117 aa13.59□□□□□ -0.23
CLPTM1-212ENST00000591304 SMCR5Q8TEV8 140 aa13.59□□□□□ -0.23
CLPTM1-212ENST00000591304 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
CLPTM1-212ENST00000591304 B5MCH6 92 aa13.58□□□□□ -0.24
CLPTM1-212ENST00000591304 NPC2P61916 151 aa13.57□□□□□ -0.24
CLPTM1-212ENST00000591304 SOSTDC1Q6X4U4 206 aa13.57□□□□□ -0.24
CLPTM1-212ENST00000591304 S100A1P23297 94 aa13.55□□□□□ -0.24
CLPTM1-212ENST00000591304 LITAFQ99732 161 aa13.55□□□□□ -0.24
CLPTM1-212ENST00000591304 SPANXCQ9NY87 97 aa13.55□□□□□ -0.24
CLPTM1-212ENST00000591304 TRAV23DV6A0A075B6W5 121 aa13.54□□□□□ -0.24
CLPTM1-212ENST00000591304 JOSD1Q15040 202 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms