RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 HIGD1BQ9P298 99 aa4.88□□□□□ -1.63
SMAD4-210ENST00000590061 M0R143 59 aa4.87□□□□□ -1.63
SMAD4-210ENST00000590061 PPDPFQ9H3Y8 114 aa4.87□□□□□ -1.63
SMAD4-210ENST00000590061 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
SMAD4-210ENST00000590061 LCE6AA0A183 80 aa4.86□□□□□ -1.63
SMAD4-210ENST00000590061 IFITM1P13164 125 aa4.86□□□□□ -1.63
SMAD4-210ENST00000590061 KRTAP26-1Q6PEX3 210 aa4.86□□□□□ -1.63
SMAD4-210ENST00000590061 CAMK2N2Q96S95 79 aa4.86□□□□□ -1.63
SMAD4-210ENST00000590061 TMEM126AQ9H061 195 aa4.86□□□□□ -1.63
SMAD4-210ENST00000590061 CSMD3Q7Z407 3707 aa4.85□□□□□ -1.63
SMAD4-210ENST00000590061 HNRNPA3P51991 378 aaKnown RBP4.85□□□□□ -1.63
SMAD4-210ENST00000590061 SYCNQ0VAF6 134 aa4.85□□□□□ -1.63
SMAD4-210ENST00000590061 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMAD4-210ENST00000590061 MEIG1Q5JSS6 88 aa4.85□□□□□ -1.63
SMAD4-210ENST00000590061 LINC00474Q9P2X8 69 aa4.85□□□□□ -1.63
SMAD4-210ENST00000590061 SS18L2Q9UHA2 77 aa4.85□□□□□ -1.63
SMAD4-210ENST00000590061 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
SMAD4-210ENST00000590061 RPL24P83731 157 aaKnown RBP4.84□□□□□ -1.63
SMAD4-210ENST00000590061 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-210ENST00000590061 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
SMAD4-210ENST00000590061 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 M0R2N4 97 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 HSD52Q0P140 79 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 KIAA0087Q14695 138 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
SMAD4-210ENST00000590061 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 CARD19Q96LW7 228 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 ERG28Q9UKR5 140 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 VPS13DQ5THJ4 4388 aa4.83□□□□□ -1.64
SMAD4-210ENST00000590061 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 LINC00158P58513 81 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 C15orf56Q8N910 161 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 SPANXDQ9BXN6 97 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 KRTAP1-5Q9BYS1 174 aa4.82□□□□□ -1.64
SMAD4-210ENST00000590061 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
SMAD4-210ENST00000590061 A6NDN8 102 aa4.81□□□□□ -1.64
SMAD4-210ENST00000590061 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
SMAD4-210ENST00000590061 Q6ZRN7 208 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-210ENST00000590061 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
SMAD4-210ENST00000590061 STARD9Q9P2P6 4700 aa4.81□□□□□ -1.64
SMAD4-210ENST00000590061 A0A087WTM6 91 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 XGP55808 180 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 FAM19A1Q7Z5A9 133 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 Q8N814 137 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 PRO1933Q9H354 126 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 RYR2Q92736 4967 aa4.8□□□□□ -1.64
SMAD4-210ENST00000590061 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 NDUFC2O95298 119 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 BATFQ16520 125 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 C4orf26Q17RF5 130 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 UNQ6190/PRO20217Q6UXQ8 127 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
SMAD4-210ENST00000590061 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 SMIM13P0DJ93 91 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 PFN2P35080 140 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 C2orf82Q6UX34 121 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 Q6ZRU5 148 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
SMAD4-210ENST00000590061 CEND1Q8N111 149 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
SMAD4-210ENST00000590061 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 J3KT08 172 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
SMAD4-210ENST00000590061 COL5A1-AS1Q5SY13 56 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 MIR7-3HGQ8N6C7 128 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 C6orf48Q9UBA6 75 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 DNAH1Q9P2D7 4330 aa4.77□□□□□ -1.65
SMAD4-210ENST00000590061 IGLV5-52A0A0A0MRZ9 124 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 C16orf90A8MZG2 172 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 LECT2O14960 151 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 SNCGO76070 127 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
SMAD4-210ENST00000590061 C2orf91Q6ZV80 131 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 RAB37Q96AX2 223 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
SMAD4-210ENST00000590061 A0A1B0GX51 115 aa4.75□□□□□ -1.65
SMAD4-210ENST00000590061 J3QR89 54 aa4.75□□□□□ -1.65
SMAD4-210ENST00000590061 LYRM7Q5U5X0 104 aa4.75□□□□□ -1.65
SMAD4-210ENST00000590061 LITAFQ99732 161 aa4.75□□□□□ -1.65
SMAD4-210ENST00000590061 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
SMAD4-210ENST00000590061 A0A0B4J2C4 111 aa4.74□□□□□ -1.65
SMAD4-210ENST00000590061 RTL8CO15255 209 aa4.74□□□□□ -1.65
SMAD4-210ENST00000590061 COX6CP09669 75 aa4.74□□□□□ -1.65
SMAD4-210ENST00000590061 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
SMAD4-210ENST00000590061 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms