RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
H3F3B-208ENST00000589599 HERV-K104P63124 156 aa10.28□□□□□ -0.76
H3F3B-208ENST00000589599 TNXBP22105 4242 aa10.27□□□□□ -0.76
H3F3B-208ENST00000589599 LINC00587B1AMM8 73 aa10.27□□□□□ -0.77
H3F3B-208ENST00000589599 KRTAP10-8P60410 259 aa10.27□□□□□ -0.77
H3F3B-208ENST00000589599 HERVK_113P61574 105 aa10.27□□□□□ -0.77
H3F3B-208ENST00000589599 MYMXA0A1B0GTQ4 84 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 ZNF861PO60384 105 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 BCE1O60756 84 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 IGKCP01834 107 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
H3F3B-208ENST00000589599 A0A0U1RRA0 63 aa10.25□□□□□ -0.77
H3F3B-208ENST00000589599 LEPROTO15243 131 aa10.25□□□□□ -0.77
H3F3B-208ENST00000589599 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
H3F3B-208ENST00000589599 SMIM13P0DJ93 91 aa10.24□□□□□ -0.77
H3F3B-208ENST00000589599 VPREB1P12018 145 aa10.24□□□□□ -0.77
H3F3B-208ENST00000589599 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
H3F3B-208ENST00000589599 IGKV2-28A0A075B6P5 120 aa10.21□□□□□ -0.77
H3F3B-208ENST00000589599 SYS1-DBNDD2H3BUS1 97 aa10.21□□□□□ -0.77
H3F3B-208ENST00000589599 J3QQQ9 107 aa10.21□□□□□ -0.77
H3F3B-208ENST00000589599 IGKV2D-28P01615 120 aa10.21□□□□□ -0.77
H3F3B-208ENST00000589599 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
H3F3B-208ENST00000589599 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
H3F3B-208ENST00000589599 NMUP48645 174 aa10.2□□□□□ -0.78
H3F3B-208ENST00000589599 MIR7-3HGQ8N6C7 128 aa10.2□□□□□ -0.78
H3F3B-208ENST00000589599 UBE2AP49459 152 aa10.19□□□□□ -0.78
H3F3B-208ENST00000589599 TSPEAR-AS2P59090 65 aa10.19□□□□□ -0.78
H3F3B-208ENST00000589599 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
H3F3B-208ENST00000589599 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
H3F3B-208ENST00000589599 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
H3F3B-208ENST00000589599 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
H3F3B-208ENST00000589599 M0R378 163 aa10.17□□□□□ -0.78
H3F3B-208ENST00000589599 S100A1P23297 94 aa10.17□□□□□ -0.78
H3F3B-208ENST00000589599 Q8NDZ9 215 aa10.17□□□□□ -0.78
H3F3B-208ENST00000589599 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
H3F3B-208ENST00000589599 E9PLD3 99 aa10.15□□□□□ -0.78
H3F3B-208ENST00000589599 LINC01545Q5VT33 79 aa10.15□□□□□ -0.78
H3F3B-208ENST00000589599 TMEM126AQ9H061 195 aa10.15□□□□□ -0.78
H3F3B-208ENST00000589599 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
H3F3B-208ENST00000589599 RPL13AP40429 203 aaKnown RBP10.14□□□□□ -0.79
H3F3B-208ENST00000589599 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
H3F3B-208ENST00000589599 IGKV2D-26A0A0A0MRZ7 120 aa10.12□□□□□ -0.79
H3F3B-208ENST00000589599 C3orf79P0CE67 100 aa10.12□□□□□ -0.79
H3F3B-208ENST00000589599 KRTDAPP60985 99 aa10.12□□□□□ -0.79
H3F3B-208ENST00000589599 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
H3F3B-208ENST00000589599 NCR3O14931 201 aa10.11□□□□□ -0.79
H3F3B-208ENST00000589599 DAND5Q8N907 189 aa10.11□□□□□ -0.79
H3F3B-208ENST00000589599 MIEN1Q9BRT3 115 aa10.11□□□□□ -0.79
H3F3B-208ENST00000589599 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
H3F3B-208ENST00000589599 C20orf202A1L168 122 aa10.1□□□□□ -0.79
H3F3B-208ENST00000589599 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
H3F3B-208ENST00000589599 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
H3F3B-208ENST00000589599 S100A12P80511 92 aa10.09□□□□□ -0.79
H3F3B-208ENST00000589599 PRLHP81277 87 aa10.09□□□□□ -0.79
H3F3B-208ENST00000589599 PRYO14603 147 aa10.07□□□□□ -0.8
H3F3B-208ENST00000589599 CRYGAP11844 174 aa10.07□□□□□ -0.8
H3F3B-208ENST00000589599 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
H3F3B-208ENST00000589599 AKR1D1P51857 326 aa10.06□□□□□ -0.8
H3F3B-208ENST00000589599 KCNQ1DNQ9H478 68 aa10.06□□□□□ -0.8
H3F3B-208ENST00000589599 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
H3F3B-208ENST00000589599 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
H3F3B-208ENST00000589599 ZNF815PA8K554 130 aa10.04□□□□□ -0.8
H3F3B-208ENST00000589599 NDUFC2O95298 119 aa10.04□□□□□ -0.8
H3F3B-208ENST00000589599 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
H3F3B-208ENST00000589599 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
H3F3B-208ENST00000589599 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
H3F3B-208ENST00000589599 ETDCA0A1B0GVM5 59 aa10.03□□□□□ -0.8
H3F3B-208ENST00000589599 TIMM17BO60830 172 aa10.03□□□□□ -0.8
H3F3B-208ENST00000589599 DDTP30046 118 aa10.03□□□□□ -0.8
H3F3B-208ENST00000589599 FAM229BQ4G0N7 80 aa10.03□□□□□ -0.8
H3F3B-208ENST00000589599 S100A2P29034 98 aa10.02□□□□□ -0.81
H3F3B-208ENST00000589599 NPC2P61916 151 aa10.02□□□□□ -0.81
H3F3B-208ENST00000589599 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
H3F3B-208ENST00000589599 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
H3F3B-208ENST00000589599 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
H3F3B-208ENST00000589599 A0A087X002 238 aa10.01□□□□□ -0.81
H3F3B-208ENST00000589599 SPRR1AP35321 89 aa10.01□□□□□ -0.81
H3F3B-208ENST00000589599 S100A6P06703 90 aa10□□□□□ -0.81
H3F3B-208ENST00000589599 SOSTDC1Q6X4U4 206 aa9.99□□□□□ -0.81
H3F3B-208ENST00000589599 ZNF706Q9Y5V0 76 aaPredicted RBP9.99□□□□□ -0.81
H3F3B-208ENST00000589599 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
H3F3B-208ENST00000589599 ATOH7Q8N100 152 aa9.98□□□□□ -0.81
H3F3B-208ENST00000589599 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
H3F3B-208ENST00000589599 LINC00308Q8TCZ7 52 aa9.98□□□□□ -0.81
H3F3B-208ENST00000589599 LITAFQ99732 161 aa9.98□□□□□ -0.81
H3F3B-208ENST00000589599 KRTAP4-16G5E9R7 235 aaPredicted RBP9.97□□□□□ -0.81
H3F3B-208ENST00000589599 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
H3F3B-208ENST00000589599 IGLV6-57P01721 117 aa9.97□□□□□ -0.81
H3F3B-208ENST00000589599 SNRPEP62304 92 aaKnown RBP9.97□□□□□ -0.81
H3F3B-208ENST00000589599 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
H3F3B-208ENST00000589599 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
H3F3B-208ENST00000589599 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
H3F3B-208ENST00000589599 ANKRD39Q53RE8 183 aa9.96□□□□□ -0.82
H3F3B-208ENST00000589599 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.82
H3F3B-208ENST00000589599 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
H3F3B-208ENST00000589599 SPANXCQ9NY87 97 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms