RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 LINC00526Q96FQ7 95 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 ST20Q9HBF5 79 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 IGLV1-50A0A075B6I6 118 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 A0A087X002 238 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 TRBV6-5A0A0K0K1A5 114 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 S100A8P05109 93 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 LINC00313P59037 77 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 HERVK_113P63121 156 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 MEF2BQ02080 365 aaPredicted RBP3.39□□□□□ -1.87
DNMT1-220ENST00000589351 RPL39LQ96EH5 51 aaKnown RBP3.39□□□□□ -1.87
DNMT1-220ENST00000589351 IMMP2LQ96T52 175 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 CNFNQ9BYD5 112 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
DNMT1-220ENST00000589351 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 CYSLTR1Q9Y271 337 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 ZNF706Q9Y5V0 76 aaPredicted RBP3.39□□□□□ -1.87
DNMT1-220ENST00000589351 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
DNMT1-220ENST00000589351 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 C7orf77A4D0Y5 90 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 A8MWL6 223 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 BCL2L11O43521 198 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 NDUFC2O95298 119 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 PPP1R17O96001 155 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 IGLV7-43P04211 117 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 FCER1GP30273 86 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 UBE2D1P51668 147 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
DNMT1-220ENST00000589351 NUP35Q8NFH5 326 aa3.38□□□□□ -1.87
DNMT1-220ENST00000589351 G3V3Q6 166 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 BCL2P10415 239 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 CXCL6P80162 114 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 RHEBQ15382 184 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 TMEM241Q24JQ0 296 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 Q5XG85 94 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
DNMT1-220ENST00000589351 SMIM29Q86T20 159 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 OR10D4PQ8NGN7 298 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
DNMT1-220ENST00000589351 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 C9JAW5 83 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 K7ERU9 68 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 NDUFA1O15239 70 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
DNMT1-220ENST00000589351 OCIAD2Q56VL3 154 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 Q8NBF4 154 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 EIF5A2Q9GZV4 153 aaKnown RBP3.36□□□□□ -1.87
DNMT1-220ENST00000589351 TMEM191AQ9H0A3 160 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 LAMTOR2Q9Y2Q5 125 aa3.36□□□□□ -1.87
DNMT1-220ENST00000589351 TRBV20OR9-2A0A075B6H5 130 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 IGLV8-61A0A075B6I0 122 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 TRAV13-1A0A0B4J241 112 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 A8MUN3 132 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 NDUFC2-KCTD14E9PQ53 114 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 FOXA3P55318 350 aaPredicted RBP3.35□□□□□ -1.87
DNMT1-220ENST00000589351 UBE2BP63146 152 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 COA6Q5JTJ3 125 aaKnown RBP3.35□□□□□ -1.87
DNMT1-220ENST00000589351 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
DNMT1-220ENST00000589351 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 SND1-IT1Q9HBX3 110 aa3.35□□□□□ -1.87
DNMT1-220ENST00000589351 MRPL35Q9NZE8 188 aaKnown RBP3.35□□□□□ -1.87
DNMT1-220ENST00000589351 LST1O00453 97 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 HERVK_113P61574 105 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 NAT8BQ9UHF3 227 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
DNMT1-220ENST00000589351 LINC00862A6NCI5 91 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 HIGD1CA8MV81 97 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 TLX1NBP0CAT3 122 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 AKR1D1P51857 326 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 FABP9Q0Z7S8 132 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
DNMT1-220ENST00000589351 TIMM17AQ99595 171 aa3.33□□□□□ -1.88
DNMT1-220ENST00000589351 NUPR1O60356 82 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 Q6Q795 121 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 C20orf78Q9BR46 151 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 LPAP08519 4548 aa3.32□□□□□ -1.88
DNMT1-220ENST00000589351 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 FAM168BA1KXE4 195 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 J3QQQ9 107 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 ZNF861PO60384 105 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 CKS2P33552 79 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 HBBP68871 147 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 Q6ZUT4 128 aa3.31□□□□□ -1.88
DNMT1-220ENST00000589351 LINC01551Q86U37 167 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms