RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	FABP4	P15090	132 aa		12.68	□□□□□ -0.38
CIRBP-222	ENST00000589235	ZNF22	P17026	224 aa	Predicted RBP	12.68	□□□□□ -0.38
CIRBP-222	ENST00000589235	COX17	Q14061	63 aa		12.68	□□□□□ -0.38
CIRBP-222	ENST00000589235	UBE2A	P49459	152 aa		12.67	□□□□□ -0.38
CIRBP-222	ENST00000589235	S100A12	P80511	92 aa		12.67	□□□□□ -0.38
CIRBP-222	ENST00000589235	BAGE3	Q86Y29	109 aa		12.67	□□□□□ -0.38
CIRBP-222	ENST00000589235	URB1-AS1	Q96HZ7	61 aa		12.67	□□□□□ -0.38
CIRBP-222	ENST00000589235	CRYGA	P11844	174 aa		12.66	□□□□□ -0.38
CIRBP-222	ENST00000589235	RPL24	P83731	157 aa	Known RBP	12.66	□□□□□ -0.38
CIRBP-222	ENST00000589235	ERG28	Q9UKR5	140 aa		12.66	□□□□□ -0.38
CIRBP-222	ENST00000589235	PMCHL1	Q16048	86 aa		12.65	□□□□□ -0.38
CIRBP-222	ENST00000589235	TMEM170B	Q5T4T1	132 aa		12.65	□□□□□ -0.38
CIRBP-222	ENST00000589235	PRR4	Q16378	134 aa		12.64	□□□□□ -0.39
CIRBP-222	ENST00000589235	JOSD1	Q15040	202 aa	Predicted RBP	12.63	□□□□□ -0.39
CIRBP-222	ENST00000589235	PYY3	Q5JQD4	70 aa		12.63	□□□□□ -0.39
CIRBP-222	ENST00000589235	IGKV2-28	A0A075B6P5	120 aa		12.62	□□□□□ -0.39
CIRBP-222	ENST00000589235	IGKV2D-28	P01615	120 aa		12.62	□□□□□ -0.39
CIRBP-222	ENST00000589235	TYMSOS	Q8TAI1	123 aa		12.62	□□□□□ -0.39
CIRBP-222	ENST00000589235	SND1-IT1	Q9HBX3	110 aa		12.62	□□□□□ -0.39
CIRBP-222	ENST00000589235	C11orf86	A6NJI1	115 aa		12.61	□□□□□ -0.39
CIRBP-222	ENST00000589235	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.61	□□□□□ -0.39
CIRBP-222	ENST00000589235	SERF1A	O75920	110 aa		12.6	□□□□□ -0.39
CIRBP-222	ENST00000589235	ZNF625	Q96I27	306 aa	Predicted RBP	12.6	□□□□□ -0.39
CIRBP-222	ENST00000589235	RNF213	Q63HN8	5207 aa		12.59	□□□□□ -0.39
CIRBP-222	ENST00000589235	LINC00310	P59036	64 aa		12.59	□□□□□ -0.39
CIRBP-222	ENST00000589235	CHCHD1	Q96BP2	118 aa	Known RBP	12.59	□□□□□ -0.39
CIRBP-222	ENST00000589235	VPREB1	P12018	145 aa		12.58	□□□□□ -0.4
CIRBP-222	ENST00000589235		A0A087X002	238 aa		12.57	□□□□□ -0.4
CIRBP-222	ENST00000589235	TSPAN13	O95857	204 aa		12.57	□□□□□ -0.4
CIRBP-222	ENST00000589235	KRTAP13-1	Q8IUC0	172 aa		12.57	□□□□□ -0.4
CIRBP-222	ENST00000589235	TRAV12-1	A0A0B4J245	112 aa		12.56	□□□□□ -0.4
CIRBP-222	ENST00000589235	FAM19A1	Q7Z5A9	133 aa		12.56	□□□□□ -0.4
CIRBP-222	ENST00000589235	LINC00158	P58513	81 aa		12.55	□□□□□ -0.4
CIRBP-222	ENST00000589235	FAM229B	Q4G0N7	80 aa		12.55	□□□□□ -0.4
CIRBP-222	ENST00000589235	IFI27L1	Q96BM0	104 aa		12.55	□□□□□ -0.4
CIRBP-222	ENST00000589235	TMEM126A	Q9H061	195 aa		12.55	□□□□□ -0.4
CIRBP-222	ENST00000589235	TMEM223	A0PJW6	202 aa		12.52	□□□□□ -0.41
CIRBP-222	ENST00000589235	PCP4L1	A6NKN8	68 aa		12.52	□□□□□ -0.41
CIRBP-222	ENST00000589235	ANAPC11	Q9NYG5	84 aa		12.52	□□□□□ -0.41
CIRBP-222	ENST00000589235	IGKV2D-26	A0A0A0MRZ7	120 aa		12.51	□□□□□ -0.41
CIRBP-222	ENST00000589235	PRLH	P81277	87 aa		12.51	□□□□□ -0.41
CIRBP-222	ENST00000589235	LINC00587	B1AMM8	73 aa		12.5	□□□□□ -0.41
CIRBP-222	ENST00000589235	TMEM238	C9JI98	176 aa		12.5	□□□□□ -0.41
CIRBP-222	ENST00000589235	HSBP1	O75506	76 aa		12.5	□□□□□ -0.41
CIRBP-222	ENST00000589235		M0R378	163 aa		12.49	□□□□□ -0.41
CIRBP-222	ENST00000589235	MEIG1	Q5JSS6	88 aa		12.48	□□□□□ -0.41
CIRBP-222	ENST00000589235		A0A0U1RRA0	63 aa		12.47	□□□□□ -0.41
CIRBP-222	ENST00000589235	HERV-K104	P63124	156 aa		12.47	□□□□□ -0.41
CIRBP-222	ENST00000589235	LPA	P08519	4548 aa		12.46	□□□□□ -0.41
CIRBP-222	ENST00000589235	SCGB1D1	O95968	90 aa		12.46	□□□□□ -0.41
CIRBP-222	ENST00000589235	KRTAP13-2	Q52LG2	175 aa		12.46	□□□□□ -0.41
CIRBP-222	ENST00000589235	LINC00304	Q8N9R0	145 aa		12.46	□□□□□ -0.41
CIRBP-222	ENST00000589235	SMIM13	P0DJ93	91 aa		12.44	□□□□□ -0.42
CIRBP-222	ENST00000589235	CTAG1A	P78358	180 aa		12.44	□□□□□ -0.42
CIRBP-222	ENST00000589235		Q8NDZ9	215 aa		12.44	□□□□□ -0.42
CIRBP-222	ENST00000589235	MAP1LC3C	Q9BXW4	147 aa		12.44	□□□□□ -0.42
CIRBP-222	ENST00000589235	TSTD3	H0UI37	97 aa		12.43	□□□□□ -0.42
CIRBP-222	ENST00000589235	PLEKHB2	Q96CS7	222 aa		12.43	□□□□□ -0.42
CIRBP-222	ENST00000589235	HIGD2A	Q9BW72	106 aa		12.43	□□□□□ -0.42
CIRBP-222	ENST00000589235	MYMX	A0A1B0GTQ4	84 aa		12.42	□□□□□ -0.42
CIRBP-222	ENST00000589235	BOD1L2	Q8IYS8	172 aa		12.42	□□□□□ -0.42
CIRBP-222	ENST00000589235	FAM19A2	Q8N3H0	131 aa		12.42	□□□□□ -0.42
CIRBP-222	ENST00000589235	ZNF706	Q9Y5V0	76 aa	Predicted RBP	12.41	□□□□□ -0.42
CIRBP-222	ENST00000589235		H0Y8G0	127 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	LEPROTL1	O95214	131 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	C3orf79	P0CE67	100 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	KRTDAP	P60985	99 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	MIR7-3HG	Q8N6C7	128 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	NDUFA12	Q9UI09	145 aa		12.4	□□□□□ -0.42
CIRBP-222	ENST00000589235	PRY	O14603	147 aa		12.39	□□□□□ -0.43
CIRBP-222	ENST00000589235	HSPB8	Q9UJY1	196 aa		12.37	□□□□□ -0.43
CIRBP-222	ENST00000589235	PLN	P26678	52 aa		12.36	□□□□□ -0.43
CIRBP-222	ENST00000589235	NCR3	O14931	201 aa		12.35	□□□□□ -0.43
CIRBP-222	ENST00000589235	SPAG11A	Q6PDA7	123 aa		12.35	□□□□□ -0.43
CIRBP-222	ENST00000589235	LINC00337	Q8N6G1	96 aa		12.35	□□□□□ -0.43
CIRBP-222	ENST00000589235	KCNQ1DN	Q9H478	68 aa		12.35	□□□□□ -0.43
CIRBP-222	ENST00000589235		A0A0U1RQV1	116 aa		12.34	□□□□□ -0.43
CIRBP-222	ENST00000589235	ETDC	A0A1B0GVM5	59 aa		12.34	□□□□□ -0.43
CIRBP-222	ENST00000589235	LEPROT	O15243	131 aa		12.34	□□□□□ -0.43
CIRBP-222	ENST00000589235	HERVK_113	P61574	105 aa		12.34	□□□□□ -0.43
CIRBP-222	ENST00000589235	SPRR4	Q96PI1	79 aa		12.34	□□□□□ -0.43
CIRBP-222	ENST00000589235	DDT	P30046	118 aa		12.33	□□□□□ -0.44
CIRBP-222	ENST00000589235	C4orf48	Q5BLP8	95 aa		12.33	□□□□□ -0.44
CIRBP-222	ENST00000589235	PET117	Q6UWS5	81 aa		12.33	□□□□□ -0.44
CIRBP-222	ENST00000589235	VAMP8	Q9BV40	100 aa		12.33	□□□□□ -0.44
CIRBP-222	ENST00000589235	PRO1933	Q9H354	126 aa		12.33	□□□□□ -0.44
CIRBP-222	ENST00000589235	C20orf202	A1L168	122 aa		12.32	□□□□□ -0.44
CIRBP-222	ENST00000589235	RETNLB	Q9BQ08	111 aa		12.32	□□□□□ -0.44
CIRBP-222	ENST00000589235	SYS1-DBNDD2	H3BUS1	97 aa		12.31	□□□□□ -0.44
CIRBP-222	ENST00000589235	SPRR1A	P35321	89 aa		12.31	□□□□□ -0.44
CIRBP-222	ENST00000589235	C3orf22	Q8N5N4	141 aa		12.31	□□□□□ -0.44
CIRBP-222	ENST00000589235	DPM2	O94777	84 aa		12.3	□□□□□ -0.44
CIRBP-222	ENST00000589235	NMU	P48645	174 aa		12.3	□□□□□ -0.44
CIRBP-222	ENST00000589235	TRBV10-3	A0A0K0K1G6	114 aa		12.29	□□□□□ -0.44
CIRBP-222	ENST00000589235	SMCR5	Q8TEV8	140 aa		12.29	□□□□□ -0.44
CIRBP-222	ENST00000589235	MIEN1	Q9BRT3	115 aa		12.29	□□□□□ -0.44
CIRBP-222	ENST00000589235	IGLV7-46	A0A075B6I9	117 aa		12.28	□□□□□ -0.44
CIRBP-222	ENST00000589235	LOC107984156	A0A0G2JMH3	177 aa		12.28	□□□□□ -0.44
CIRBP-222	ENST00000589235		J3QQQ9	107 aa		12.28	□□□□□ -0.44
CIRBP-222	ENST00000589235	LGALS3	P17931	250 aa	Known RBP	12.28	□□□□□ -0.44

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