RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SIX6O95475 246 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 ZNF137PP52743 207 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 CCL8P80075 99 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 MRPL54Q6P161 138 aaKnown RBP2.5□□□□□ -2.01
VMP1-208ENST00000588617 HEPN1Q6WQI6 88 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 GAFA1Q96PS6 74 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 DYNLRB1Q9NP97 96 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 URB1O60287 2271 aaKnown RBP2.5□□□□□ -2.01
VMP1-208ENST00000588617 UBR5O95071 2799 aaPredicted RBP2.5□□□□□ -2.01
VMP1-208ENST00000588617 DNAJC13O75165 2243 aa2.5□□□□□ -2.01
VMP1-208ENST00000588617 IGSF10Q6WRI0 2623 aa2.49□□□□□ -2.01
VMP1-208ENST00000588617 TRBV10-3A0A0K0K1G6 114 aa2.49□□□□□ -2.01
VMP1-208ENST00000588617 EDDM3BP56851 147 aa2.49□□□□□ -2.01
VMP1-208ENST00000588617 RBM3P98179 157 aaKnown RBP2.49□□□□□ -2.01
VMP1-208ENST00000588617 Q8N8P6 123 aa2.49□□□□□ -2.01
VMP1-208ENST00000588617 UMAD1C9J7I0 102 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 M0R1W7 72 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 GYPAP02724 150 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 NMBP08949 121 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 KRTAP10-4P60372 401 aaPredicted RBP2.48□□□□□ -2.01
VMP1-208ENST00000588617 S100A10P60903 97 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 KLKP1Q107X0 134 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 C20orf197Q8N268 126 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 BET1LQ9NYM9 111 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 ASH1LQ9NR48 2969 aaKnown RBP2.48□□□□□ -2.01
VMP1-208ENST00000588617 DCHS2Q6V1P9 2916 aa2.48□□□□□ -2.01
VMP1-208ENST00000588617 ACACBO00763 2458 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 DOPEY1Q5JWR5 2465 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 TACC2O95359 2948 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 LRBAP50851 2863 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 OOSP1A8MZH6 123 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 SSSCA1O60232 199 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 CFDP00746 253 aaPredicted RBP2.47□□□□□ -2.01
VMP1-208ENST00000588617 SAA2P0DJI9 122 aaPredicted RBP2.47□□□□□ -2.01
VMP1-208ENST00000588617 SERF2P84101 59 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 ALKAL2Q6UX46 152 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 TMEM14BQ9NUH8 114 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 USP24Q9UPU5 2620 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 FLNCQ14315 2725 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 VPS13CQ709C8 3753 aa2.47□□□□□ -2.01
VMP1-208ENST00000588617 HRNRQ86YZ3 2850 aaPredicted RBP2.46□□□□□ -2.02
VMP1-208ENST00000588617 C10orf99Q6UWK7 81 aa2.46□□□□□ -2.02
VMP1-208ENST00000588617 Q8N6K4 173 aa2.46□□□□□ -2.02
VMP1-208ENST00000588617 DEFB108BQ8NET1 73 aa2.46□□□□□ -2.02
VMP1-208ENST00000588617 ROS1P08922 2347 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 MYO18BQ8IUG5 2567 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 EPG5Q9HCE0 2579 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 FAM24AA6NFZ4 105 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 CCL3L1P16619 93 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 PRCDQ00LT1 54 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 RPL39P5Q59GN2 51 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 C9orf153Q5TBE3 101 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 MINOS1Q5TGZ0 78 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 TMEM167AQ8TBQ9 72 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 PSENENQ9NZ42 101 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 ABCA4P78363 2273 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 CELSR2Q9HCU4 2923 aa2.45□□□□□ -2.02
VMP1-208ENST00000588617 SVEP1Q4LDE5 3571 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 PLCE1Q9P212 2302 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 CEBPZOSA8MTT3 80 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 NDUFA3O95167 84 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 TCEAL7Q9BRU2 100 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 NPVFQ9HCQ7 196 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 NDUFA4L2Q9NRX3 87 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 ZNF462Q96JM2 2506 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 CSMD2Q7Z408 3487 aa2.44□□□□□ -2.02
VMP1-208ENST00000588617 USP9XQ93008 2570 aaPredicted RBP2.43□□□□□ -2.02
VMP1-208ENST00000588617 C20orf202A1L168 122 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 TMEM218A2RU14 115 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 PRH1P02810 166 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 IAPPP10997 89 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 SNCAP37840 140 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 UBE2D1P51668 147 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 ELOF1P60002 83 aaKnown RBP2.43□□□□□ -2.02
VMP1-208ENST00000588617 PEA15Q15121 130 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 SVBPQ8N300 66 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 LEAP2Q969E1 77 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 C12orf57Q99622 126 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 BPESC1Q9GZL8 116 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 ARL2-SNX15V9GYD0 113 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 CSMD1Q96PZ7 3565 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 FBN2P35556 2912 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 CRYBG3Q68DQ2 2970 aa2.43□□□□□ -2.02
VMP1-208ENST00000588617 MYO7BQ6PIF6 2116 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 CADP27708 2225 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 LRRK2Q5S007 2527 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 ZFYVE26Q68DK2 2539 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 CENPEQ02224 2701 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 TPRP12270 2363 aaKnown RBP2.42□□□□□ -2.02
VMP1-208ENST00000588617 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 UBE2L5PA0A1B0GUS4 154 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 RBAKDNA6NC62 111 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 LYNX1G3V0Z9 82 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 COX6B1P14854 86 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 KLK9Q2XQG4 91 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 VMO1Q7Z5L0 202 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 FAM213BQ8TBF2 198 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 COX7B2Q8TF08 81 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 MANBALQ9NQG1 85 aa2.42□□□□□ -2.02
VMP1-208ENST00000588617 CHD6Q8TD26 2715 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms