RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 DPM2O94777 84 aa12.49□□□□□ -0.41
CIRBP-209ENST00000586555 RPL28P46779 137 aaKnown RBP12.49□□□□□ -0.41
CIRBP-209ENST00000586555 HERVK_113P61574 105 aa12.49□□□□□ -0.41
CIRBP-209ENST00000586555 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
CIRBP-209ENST00000586555 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BKO60814 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BJP06899 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BOP23527 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BBP33778 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BDP58876 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BCP62807 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST2H2BEQ16778 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BHQ93079 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BNQ99877 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 HIST1H2BMQ99879 126 aa12.48□□□□□ -0.41
CIRBP-209ENST00000586555 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
CIRBP-209ENST00000586555 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
CIRBP-209ENST00000586555 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
CIRBP-209ENST00000586555 LEPROTO15243 131 aa12.46□□□□□ -0.41
CIRBP-209ENST00000586555 IGKCP01834 107 aa12.46□□□□□ -0.41
CIRBP-209ENST00000586555 VPREB1P12018 145 aa12.46□□□□□ -0.41
CIRBP-209ENST00000586555 IGKV2-28A0A075B6P5 120 aa12.44□□□□□ -0.42
CIRBP-209ENST00000586555 IGKV2D-28P01615 120 aa12.44□□□□□ -0.42
CIRBP-209ENST00000586555 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
CIRBP-209ENST00000586555 RNF213Q63HN8 5207 aa12.44□□□□□ -0.42
CIRBP-209ENST00000586555 IGLV1-50A0A075B6I6 118 aa12.43□□□□□ -0.42
CIRBP-209ENST00000586555 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
CIRBP-209ENST00000586555 UBE2AP49459 152 aa12.42□□□□□ -0.42
CIRBP-209ENST00000586555 LGALS3P17931 250 aaKnown RBP12.41□□□□□ -0.42
CIRBP-209ENST00000586555 NMUP48645 174 aa12.41□□□□□ -0.42
CIRBP-209ENST00000586555 PRR26Q8N8Z3 221 aa12.41□□□□□ -0.42
CIRBP-209ENST00000586555 J3QQQ9 107 aa12.4□□□□□ -0.42
CIRBP-209ENST00000586555 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
CIRBP-209ENST00000586555 MIR7-3HGQ8N6C7 128 aa12.4□□□□□ -0.42
CIRBP-209ENST00000586555 SYS1-DBNDD2H3BUS1 97 aa12.39□□□□□ -0.43
CIRBP-209ENST00000586555 M0R378 163 aa12.38□□□□□ -0.43
CIRBP-209ENST00000586555 KRTAP1-4P0C5Y4 121 aa12.38□□□□□ -0.43
CIRBP-209ENST00000586555 BOD1L2Q8IYS8 172 aa12.38□□□□□ -0.43
CIRBP-209ENST00000586555 TMEM126AQ9H061 195 aa12.37□□□□□ -0.43
CIRBP-209ENST00000586555 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
CIRBP-209ENST00000586555 PET117Q6UWS5 81 aa12.35□□□□□ -0.43
CIRBP-209ENST00000586555 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
CIRBP-209ENST00000586555 Q8NDZ9 215 aa12.35□□□□□ -0.43
CIRBP-209ENST00000586555 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
CIRBP-209ENST00000586555 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
CIRBP-209ENST00000586555 E9PLD3 99 aa12.33□□□□□ -0.44
CIRBP-209ENST00000586555 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
CIRBP-209ENST00000586555 S100A12P80511 92 aa12.32□□□□□ -0.44
CIRBP-209ENST00000586555 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
CIRBP-209ENST00000586555 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
CIRBP-209ENST00000586555 S100A1P23297 94 aa12.31□□□□□ -0.44
CIRBP-209ENST00000586555 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
CIRBP-209ENST00000586555 PRLHP81277 87 aa12.3□□□□□ -0.44
CIRBP-209ENST00000586555 LOC107984156A0A0G2JMH3 177 aa12.29□□□□□ -0.44
CIRBP-209ENST00000586555 NCR3O14931 201 aa12.29□□□□□ -0.44
CIRBP-209ENST00000586555 CRYGAP11844 174 aa12.29□□□□□ -0.44
CIRBP-209ENST00000586555 ARL17AQ8IVW1 177 aa12.29□□□□□ -0.44
CIRBP-209ENST00000586555 DAND5Q8N907 189 aa12.28□□□□□ -0.44
CIRBP-209ENST00000586555 LPAP08519 4548 aa12.28□□□□□ -0.44
CIRBP-209ENST00000586555 PRYO14603 147 aa12.27□□□□□ -0.45
CIRBP-209ENST00000586555 C3orf79P0CE67 100 aa12.27□□□□□ -0.45
CIRBP-209ENST00000586555 KRTDAPP60985 99 aa12.27□□□□□ -0.45
CIRBP-209ENST00000586555 C20orf202A1L168 122 aa12.26□□□□□ -0.45
CIRBP-209ENST00000586555 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
CIRBP-209ENST00000586555 TRBV10-2A0A0K0K1G8 114 aa12.24□□□□□ -0.45
CIRBP-209ENST00000586555 KCNQ1DNQ9H478 68 aa12.24□□□□□ -0.45
CIRBP-209ENST00000586555 AKR1D1P51857 326 aa12.23□□□□□ -0.45
CIRBP-209ENST00000586555 FAM229BQ4G0N7 80 aa12.23□□□□□ -0.45
CIRBP-209ENST00000586555 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
CIRBP-209ENST00000586555 TRBV10-3A0A0K0K1G6 114 aa12.22□□□□□ -0.45
CIRBP-209ENST00000586555 NDUFC2O95298 119 aa12.22□□□□□ -0.45
CIRBP-209ENST00000586555 LINC00337Q8N6G1 96 aa12.22□□□□□ -0.45
CIRBP-209ENST00000586555 HIGD2AQ9BW72 106 aa12.22□□□□□ -0.45
CIRBP-209ENST00000586555 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-209ENST00000586555 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.45
CIRBP-209ENST00000586555 A0A087X002 238 aa12.2□□□□□ -0.46
CIRBP-209ENST00000586555 DDTP30046 118 aa12.2□□□□□ -0.46
CIRBP-209ENST00000586555 S100A7L2Q5SY68 101 aa12.2□□□□□ -0.46
CIRBP-209ENST00000586555 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
CIRBP-209ENST00000586555 ANAPC11Q9NYG5 84 aa12.19□□□□□ -0.46
CIRBP-209ENST00000586555 TIMM17BO60830 172 aa12.18□□□□□ -0.46
CIRBP-209ENST00000586555 SPRR1AP35321 89 aa12.18□□□□□ -0.46
CIRBP-209ENST00000586555 NPC2P61916 151 aa12.18□□□□□ -0.46
CIRBP-209ENST00000586555 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
CIRBP-209ENST00000586555 ZNF706Q9Y5V0 76 aaPredicted RBP12.18□□□□□ -0.46
CIRBP-209ENST00000586555 CBY1Q9Y3M2 126 aa12.16□□□□□ -0.46
CIRBP-209ENST00000586555 S100A2P29034 98 aa12.15□□□□□ -0.46
CIRBP-209ENST00000586555 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-209ENST00000586555 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
CIRBP-209ENST00000586555 LINC00308Q8TCZ7 52 aa12.13□□□□□ -0.47
CIRBP-209ENST00000586555 IGLV6-57P01721 117 aa12.12□□□□□ -0.47
CIRBP-209ENST00000586555 S100A6P06703 90 aa12.12□□□□□ -0.47
CIRBP-209ENST00000586555 LITAFQ99732 161 aa12.12□□□□□ -0.47
CIRBP-209ENST00000586555 SPANXCQ9NY87 97 aa12.12□□□□□ -0.47
CIRBP-209ENST00000586555 KRTAP13-2Q52LG2 175 aa12.11□□□□□ -0.47
CIRBP-209ENST00000586555 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
CIRBP-209ENST00000586555 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
CIRBP-209ENST00000586555 SPRR4Q96PI1 79 aa12.11□□□□□ -0.47
CIRBP-209ENST00000586555 TRAV23DV6A0A075B6W5 121 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms