RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 ABCC2Q92887 1545 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 ACACBO00763 2458 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 SPHKAPQ2M3C7 1700 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 LAMA3Q16787 3333 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 EIF4G3O43432 1585 aaKnown RBP-0.62□□□□□ -2.51
SKA2-210ENST00000584089 NBEAL2Q6ZNJ1 2754 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 DMXL1Q9Y485 3027 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 A0A1B0GU69 56 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 NAP1L6A6NFF2 107 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 MIF4GDA9UHW6 222 aaKnown RBP-0.62□□□□□ -2.51
SKA2-210ENST00000584089 C6orf201Q7Z4U5 140 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 C1orf54Q8WWF1 131 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 PP6455Q8WZ26 134 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 TSLPQ969D9 159 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 LINC00470Q9BZP3 86 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 CDKN2A-AS1Q9UH64 79 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 PRO1854Q9UHT4 67 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 PKD1L3Q7Z443 1732 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 TLN2Q9Y4G6 2542 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 MYOM2P54296 1465 aa-0.62□□□□□ -2.51
SKA2-210ENST00000584089 ABCC5O15440 1437 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 SCAPERQ9BY12 1400 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ANKRD50Q9ULJ7 1429 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ARHGAP5Q13017 1502 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 C4AP0C0L4 1744 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 C4BP0C0L5 1744 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ABCA3Q99758 1704 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ANK3Q12955 4377 aaKnown RBP-0.63□□□□□ -2.51
SKA2-210ENST00000584089 FAM223BA6NKX1 122 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 H3BQ15 152 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 H3BQF6 201 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 CATR1Q13166 79 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 MEIG1Q5JSS6 88 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 COX6B2Q6YFQ2 88 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.63□□□□□ -2.51
SKA2-210ENST00000584089 HIGD1BQ9P298 99 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 SAMD9Q5K651 1589 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 KIAA1109Q2LD37 5005 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 RGPD3A6NKT7 1758 aaPredicted RBP-0.63□□□□□ -2.51
SKA2-210ENST00000584089 RGPD4Q7Z3J3 1758 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 LYSTQ99698 3801 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 DNAH2Q9P225 4427 aa-0.63□□□□□ -2.51
SKA2-210ENST00000584089 ALKQ9UM73 1620 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 KNDC1Q76NI1 1749 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 CRYBG1Q9Y4K1 1723 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 TRAV30A0A087WSZ9 112 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 A0A0G2JND7 137 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 TRAPPC2P0DI81 140 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 TRAPPC2BP0DI82 140 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 SNCAP37840 140 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 MT1HP80294 61 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 Q0VG73 95 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 LCN9Q8WX39 176 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 C12orf57Q99622 126 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 CGREF1Q99674 301 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 LINC00474Q9P2X8 69 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 WDR87Q6ZQQ6 2873 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 PLECQ15149 4684 aaKnown RBP-0.64□□□□□ -2.51
SKA2-210ENST00000584089 MAP3K1Q13233 1512 aa-0.64□□□□□ -2.51
SKA2-210ENST00000584089 PLXNC1O60486 1568 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 FRYQ5TBA9 3013 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 SPTY2D1-AS1A0A0U1RR47 76 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 FAM24AA6NFZ4 105 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 FAM25AB3EWG3 89 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 FAM25CB3EWG5 89 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 FAM25GB3EWG6 89 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 H0Y9P7 68 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 H3BNG1 76 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 GNG11P61952 73 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 NMSQ5H8A3 153 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 WFDC13Q8IUB5 93 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 CC2D2AQ9P2K1 1620 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 DNAH11Q96DT5 4516 aa-0.65□□□□□ -2.51
SKA2-210ENST00000584089 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.65□□□□□ -2.51
SKA2-210ENST00000584089 UBR3Q6ZT12 1888 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 ARMS2P0C7Q2 107 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 KRTDAPP60985 99 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 HEPN1Q6WQI6 88 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 VAMP8Q9BV40 100 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 DPH3P1Q9H4G8 78 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 MANBALQ9NQG1 85 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 IER3IP1Q9Y5U9 82 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 DSPP15924 2871 aaKnown RBP-0.66□□□□□ -2.52
SKA2-210ENST00000584089 A0A0C4DFX4 3053 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 RELNP78509 3460 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 KALRNO60229 2985 aa-0.66□□□□□ -2.52
SKA2-210ENST00000584089 CEP295Q9C0D2 2601 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 LRRC9Q6ZRR7 1453 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 RAPGEF2Q9Y4G8 1499 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 MYO9AB2RTY4 2548 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 FAM135AQ9P2D6 1515 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 RYR2Q92736 4967 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 WIZO95785 1651 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 TRBV7-7A0A0K0K1E9 115 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 OOSP1A8MZH6 123 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 K7EP13 123 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 NDUFC1O43677 76 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 MPC2O95563 127 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 AKAIN1P0CW23 69 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms