RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 LCA10Q71F78 164 aa8.14□□□□□ -1.11
CDK5RAP3-231ENST00000584063 Q75L30 129 aa8.14□□□□□ -1.11
CDK5RAP3-231ENST00000584063 MP68P56378 58 aa8.13□□□□□ -1.11
CDK5RAP3-231ENST00000584063 H0Y9J4 135 aa8.12□□□□□ -1.11
CDK5RAP3-231ENST00000584063 Q6ZVQ6 151 aa8.12□□□□□ -1.11
CDK5RAP3-231ENST00000584063 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
CDK5RAP3-231ENST00000584063 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
CDK5RAP3-231ENST00000584063 LINC00643Q86TS7 51 aa8.11□□□□□ -1.11
CDK5RAP3-231ENST00000584063 TNP2Q05952 138 aa8.11□□□□□ -1.11
CDK5RAP3-231ENST00000584063 NDUFA1O15239 70 aa8.1□□□□□ -1.11
CDK5RAP3-231ENST00000584063 TRGV2A0A075B6R0 118 aa8.1□□□□□ -1.11
CDK5RAP3-231ENST00000584063 IGLV1-51P01701 117 aa8.1□□□□□ -1.11
CDK5RAP3-231ENST00000584063 GIG44P09565 113 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-231ENST00000584063 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
CDK5RAP3-231ENST00000584063 A0A096LPF7 62 aa8.09□□□□□ -1.11
CDK5RAP3-231ENST00000584063 RPL36AP83881 106 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-231ENST00000584063 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
CDK5RAP3-231ENST00000584063 RPL36ALQ969Q0 106 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-231ENST00000584063 FUSP35637 526 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDK5RAP3-231ENST00000584063 NBEAL1Q6ZS30 2694 aa8.08□□□□□ -1.12
CDK5RAP3-231ENST00000584063 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
CDK5RAP3-231ENST00000584063 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
CDK5RAP3-231ENST00000584063 A0A087WZ39 114 aa8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 K7EQD1 137 aa8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 BAALC-AS2P0C853 105 aa8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 C9orf129Q5T035 196 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
CDK5RAP3-231ENST00000584063 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
CDK5RAP3-231ENST00000584063 H7BZZ5 65 aa8.06□□□□□ -1.12
CDK5RAP3-231ENST00000584063 LINC00158P58513 81 aa8.06□□□□□ -1.12
CDK5RAP3-231ENST00000584063 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
CDK5RAP3-231ENST00000584063 IGLV5-39A0A0G2JS06 123 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 SLPIP03973 132 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 C20orf197Q8N268 126 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 DEFB130BP0DP73 79 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 DEFB130AP0DP74 79 aa8.05□□□□□ -1.12
CDK5RAP3-231ENST00000584063 IGLV5-45A0A087WSX0 123 aa8.04□□□□□ -1.12
CDK5RAP3-231ENST00000584063 TRGV4A0A0C4DH28 118 aa8.04□□□□□ -1.12
CDK5RAP3-231ENST00000584063 A0A087WYN8 130 aa8.03□□□□□ -1.12
CDK5RAP3-231ENST00000584063 XCL1P47992 114 aa8.03□□□□□ -1.12
CDK5RAP3-231ENST00000584063 ACYP1P07311 99 aa8.03□□□□□ -1.12
CDK5RAP3-231ENST00000584063 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-231ENST00000584063 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
CDK5RAP3-231ENST00000584063 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
CDK5RAP3-231ENST00000584063 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
CDK5RAP3-231ENST00000584063 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 UBE2BP63146 152 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 DEFB4AO15263 64 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
CDK5RAP3-231ENST00000584063 CRPP02741 224 aa8□□□□□ -1.13
CDK5RAP3-231ENST00000584063 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
CDK5RAP3-231ENST00000584063 COX7B2Q8TF08 81 aa8□□□□□ -1.13
CDK5RAP3-231ENST00000584063 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
CDK5RAP3-231ENST00000584063 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 Q8N3U1 123 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 A8MU10 97 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 CCL18P55774 89 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
CDK5RAP3-231ENST00000584063 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
CDK5RAP3-231ENST00000584063 NCR3O14931 201 aa7.98□□□□□ -1.13
CDK5RAP3-231ENST00000584063 LECT2O14960 151 aa7.98□□□□□ -1.13
CDK5RAP3-231ENST00000584063 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
CDK5RAP3-231ENST00000584063 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
CDK5RAP3-231ENST00000584063 DNAL4O96015 105 aa7.97□□□□□ -1.13
CDK5RAP3-231ENST00000584063 SPTSSBQ8NFR3 76 aa7.96□□□□□ -1.13
CDK5RAP3-231ENST00000584063 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.13
CDK5RAP3-231ENST00000584063 ANK2Q01484 3957 aa7.96□□□□□ -1.14
CDK5RAP3-231ENST00000584063 A0A087WVE0 104 aa7.96□□□□□ -1.14
CDK5RAP3-231ENST00000584063 DEFB121Q5J5C9 76 aa7.96□□□□□ -1.14
CDK5RAP3-231ENST00000584063 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
CDK5RAP3-231ENST00000584063 IBA57-AS1B1ANH7 110 aa7.95□□□□□ -1.14
CDK5RAP3-231ENST00000584063 C9orf116Q5BN46 136 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-231ENST00000584063 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
CDK5RAP3-231ENST00000584063 C16orf74Q96GX8 76 aa7.94□□□□□ -1.14
CDK5RAP3-231ENST00000584063 IGHV3OR16-9A0A0B4J2B5 98 aa7.93□□□□□ -1.14
CDK5RAP3-231ENST00000584063 WFDC9Q8NEX5 89 aa7.93□□□□□ -1.14
CDK5RAP3-231ENST00000584063 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
CDK5RAP3-231ENST00000584063 F8WEM9 126 aa7.93□□□□□ -1.14
CDK5RAP3-231ENST00000584063 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
CDK5RAP3-231ENST00000584063 A6NN06 94 aa7.92□□□□□ -1.14
CDK5RAP3-231ENST00000584063 TENM3Q9P273 2699 aa7.92□□□□□ -1.14
CDK5RAP3-231ENST00000584063 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-231ENST00000584063 PRB2P02812 416 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 CELA1Q9UNI1 258 aa7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 ESRGQ1W209 222 aa7.91□□□□□ -1.14
CDK5RAP3-231ENST00000584063 PSPHP1O15172 72 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms