RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
SRSF1-204ENST00000581979 A0A0B4J2C4 111 aa8.25□□□□□ -1.09
SRSF1-204ENST00000581979 TRBV30A0A0K0K1B3 111 aa8.25□□□□□ -1.09
SRSF1-204ENST00000581979 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
SRSF1-204ENST00000581979 Q6ZRU5 148 aa8.25□□□□□ -1.09
SRSF1-204ENST00000581979 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
SRSF1-204ENST00000581979 LECT2O14960 151 aa8.24□□□□□ -1.09
SRSF1-204ENST00000581979 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
SRSF1-204ENST00000581979 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 H3BUT2 72 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
SRSF1-204ENST00000581979 CARD19Q96LW7 228 aa8.22□□□□□ -1.09
SRSF1-204ENST00000581979 RYR1P21817 5038 aa8.22□□□□□ -1.09
SRSF1-204ENST00000581979 CDK2AP2O75956 126 aa8.21□□□□□ -1.09
SRSF1-204ENST00000581979 HSPG2P98160 4391 aa8.21□□□□□ -1.1
SRSF1-204ENST00000581979 TSPAN13O95857 204 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
SRSF1-204ENST00000581979 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 H7C2G1 150 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 WFDC2Q14508 124 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 VAMP3Q15836 100 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 Q1RN00 199 aa8.2□□□□□ -1.1
SRSF1-204ENST00000581979 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
SRSF1-204ENST00000581979 A0A1W2PPM0 123 aa8.19□□□□□ -1.1
SRSF1-204ENST00000581979 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
SRSF1-204ENST00000581979 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
SRSF1-204ENST00000581979 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
SRSF1-204ENST00000581979 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
SRSF1-204ENST00000581979 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
SRSF1-204ENST00000581979 NDUFC2-KCTD14E9PQ53 114 aa8.17□□□□□ -1.1
SRSF1-204ENST00000581979 SLPIP03973 132 aa8.17□□□□□ -1.1
SRSF1-204ENST00000581979 FABP2P12104 132 aa8.17□□□□□ -1.1
SRSF1-204ENST00000581979 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
SRSF1-204ENST00000581979 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
SRSF1-204ENST00000581979 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 NDUFC2O95298 119 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 PSMB2P49721 201 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 GAGE2EQ4V326 116 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 GAGE2DQ9UEU5 116 aa8.16□□□□□ -1.1
SRSF1-204ENST00000581979 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
SRSF1-204ENST00000581979 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
SRSF1-204ENST00000581979 LRCOL1A6NCL2 159 aa8.15□□□□□ -1.11
SRSF1-204ENST00000581979 Q6ZRP5 223 aa8.15□□□□□ -1.11
SRSF1-204ENST00000581979 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.11
SRSF1-204ENST00000581979 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
SRSF1-204ENST00000581979 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
SRSF1-204ENST00000581979 TLX1NBP0CAT3 122 aa8.14□□□□□ -1.11
SRSF1-204ENST00000581979 LINC00337Q8N6G1 96 aa8.14□□□□□ -1.11
SRSF1-204ENST00000581979 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
SRSF1-204ENST00000581979 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
SRSF1-204ENST00000581979 NCR3O14931 201 aa8.13□□□□□ -1.11
SRSF1-204ENST00000581979 SCGB1C2P0DMR2 95 aa8.13□□□□□ -1.11
SRSF1-204ENST00000581979 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
SRSF1-204ENST00000581979 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
SRSF1-204ENST00000581979 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
SRSF1-204ENST00000581979 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
SRSF1-204ENST00000581979 GTF2H5Q6ZYL4 71 aa8.12□□□□□ -1.11
SRSF1-204ENST00000581979 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
SRSF1-204ENST00000581979 K7EP34 96 aa8.12□□□□□ -1.11
SRSF1-204ENST00000581979 Q8NDZ9 215 aa8.12□□□□□ -1.11
SRSF1-204ENST00000581979 TRIAP1O43715 76 aa8.11□□□□□ -1.11
SRSF1-204ENST00000581979 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
SRSF1-204ENST00000581979 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
SRSF1-204ENST00000581979 DNAH5Q8TE73 4624 aa8.11□□□□□ -1.11
SRSF1-204ENST00000581979 A0A087WTM6 91 aa8.1□□□□□ -1.11
SRSF1-204ENST00000581979 COX6CP09669 75 aa8.1□□□□□ -1.11
SRSF1-204ENST00000581979 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
SRSF1-204ENST00000581979 Q8N1X5 172 aa8.1□□□□□ -1.11
SRSF1-204ENST00000581979 Q8N814 137 aa8.1□□□□□ -1.11
SRSF1-204ENST00000581979 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
SRSF1-204ENST00000581979 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
SRSF1-204ENST00000581979 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
SRSF1-204ENST00000581979 VPREB1P12018 145 aa8.08□□□□□ -1.12
SRSF1-204ENST00000581979 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
SRSF1-204ENST00000581979 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
SRSF1-204ENST00000581979 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
SRSF1-204ENST00000581979 TCL1BO95988 128 aa8.06□□□□□ -1.12
SRSF1-204ENST00000581979 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.122e-8■■□□□ 12.8
SRSF1-204ENST00000581979 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
SRSF1-204ENST00000581979 H3BMG7 143 aa8.05□□□□□ -1.12
SRSF1-204ENST00000581979 M0R378 163 aa8.05□□□□□ -1.12
SRSF1-204ENST00000581979 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
SRSF1-204ENST00000581979 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
SRSF1-204ENST00000581979 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
SRSF1-204ENST00000581979 A0A096LNI7 61 aa8.04□□□□□ -1.12
SRSF1-204ENST00000581979 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
SRSF1-204ENST00000581979 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
SRSF1-204ENST00000581979 IGLV6-57P01721 117 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 XGP55808 180 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 FAM168BA1KXE4 195 aa8.03□□□□□ -1.12
SRSF1-204ENST00000581979 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
SRSF1-204ENST00000581979 FAM19A5Q7Z5A7 132 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms