RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 HIST1H2BDP58876 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST1H2BCP62807 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST2H2BEQ16778 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST1H2BHQ93079 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST1H2BNQ99877 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 HIST1H2BMQ99879 126 aa6.18□□□□□ -1.42
PPP4R1-220ENST00000581835 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
PPP4R1-220ENST00000581835 PLNP26678 52 aa6.17□□□□□ -1.42
PPP4R1-220ENST00000581835 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
PPP4R1-220ENST00000581835 Q8NDZ9 215 aa6.17□□□□□ -1.42
PPP4R1-220ENST00000581835 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 DPM2O94777 84 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 HERV-K104P63124 156 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 PMCHL2Q9BQD1 86 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 NDUFA12Q9UI09 145 aa6.16□□□□□ -1.42
PPP4R1-220ENST00000581835 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 LEPROTO15243 131 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 IGKCP01834 107 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
PPP4R1-220ENST00000581835 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 ATP6V1G1O75348 118 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 KRTAP13-1Q8IUC0 172 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 PLEKHB2Q96CS7 222 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 LRP2P98164 4655 aa6.14□□□□□ -1.43
PPP4R1-220ENST00000581835 J3QQQ9 107 aa6.13□□□□□ -1.43
PPP4R1-220ENST00000581835 HERVK_113P61574 105 aa6.13□□□□□ -1.43
PPP4R1-220ENST00000581835 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
PPP4R1-220ENST00000581835 SYS1-DBNDD2H3BUS1 97 aa6.12□□□□□ -1.43
PPP4R1-220ENST00000581835 UBE2AP49459 152 aa6.12□□□□□ -1.43
PPP4R1-220ENST00000581835 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
PPP4R1-220ENST00000581835 M0R378 163 aa6.11□□□□□ -1.43
PPP4R1-220ENST00000581835 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
PPP4R1-220ENST00000581835 BOD1L2Q8IYS8 172 aa6.11□□□□□ -1.43
PPP4R1-220ENST00000581835 LGALS3P17931 250 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-220ENST00000581835 NMUP48645 174 aa6.1□□□□□ -1.43
PPP4R1-220ENST00000581835 PRLHP81277 87 aa6.1□□□□□ -1.43
PPP4R1-220ENST00000581835 COA6Q5JTJ3 125 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-220ENST00000581835 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
PPP4R1-220ENST00000581835 A0A087X002 238 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 E9PLD3 99 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 LINC01545Q5VT33 79 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 PET117Q6UWS5 81 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 DAND5Q8N907 189 aa6.09□□□□□ -1.43
PPP4R1-220ENST00000581835 NCR3O14931 201 aa6.08□□□□□ -1.44
PPP4R1-220ENST00000581835 C3orf79P0CE67 100 aa6.08□□□□□ -1.44
PPP4R1-220ENST00000581835 CRYGAP11844 174 aa6.07□□□□□ -1.44
PPP4R1-220ENST00000581835 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
PPP4R1-220ENST00000581835 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
PPP4R1-220ENST00000581835 PRYO14603 147 aa6.06□□□□□ -1.44
PPP4R1-220ENST00000581835 SPRR1AP35321 89 aa6.06□□□□□ -1.44
PPP4R1-220ENST00000581835 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
PPP4R1-220ENST00000581835 LPAP08519 4548 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 TRBV10-3A0A0K0K1G6 114 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 TRBV10-2A0A0K0K1G8 114 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 KRTDAPP60985 99 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
PPP4R1-220ENST00000581835 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 NDUFC2O95298 119 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 S100A1P23297 94 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 SOSTDC1Q6X4U4 206 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 LINC00337Q8N6G1 96 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
PPP4R1-220ENST00000581835 EIF4EBP3O60516 100 aaPredicted RBP6.03□□□□□ -1.44
PPP4R1-220ENST00000581835 DDTP30046 118 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 NPC2P61916 151 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 S100A12P80511 92 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 LITAFQ99732 161 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 TTTY13Q9BZ97 58 aa6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 SPANXB1Q9NS25 103 aaPredicted RBP6.02□□□□□ -1.45
PPP4R1-220ENST00000581835 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
PPP4R1-220ENST00000581835 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
PPP4R1-220ENST00000581835 TIMM17BO60830 172 aa6.01□□□□□ -1.45
PPP4R1-220ENST00000581835 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
PPP4R1-220ENST00000581835 C20orf202A1L168 122 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 B5MCH6 92 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 TSPAN13O95857 204 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 IGLV6-57P01721 117 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 LINC00308Q8TCZ7 52 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 SMCR5Q8TEV8 140 aa6□□□□□ -1.45
PPP4R1-220ENST00000581835 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms