RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 HIST1H2BOP23527 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BBP33778 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BDP58876 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BCP62807 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST2H2BEQ16778 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
SMARCD2-209ENST00000581832 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
SMARCD2-209ENST00000581832 SMIM13P0DJ93 91 aa7.38□□□□□ -1.23
SMARCD2-209ENST00000581832 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 RPL28P46779 137 aaKnown RBP7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 LINC00158P58513 81 aa7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 PMCHL2Q9BQD1 86 aa7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
SMARCD2-209ENST00000581832 LEPROTO15243 131 aa7.36□□□□□ -1.23
SMARCD2-209ENST00000581832 PLNP26678 52 aa7.36□□□□□ -1.23
SMARCD2-209ENST00000581832 HERV-K104P63124 156 aa7.36□□□□□ -1.23
SMARCD2-209ENST00000581832 TMEM238C9JI98 176 aa7.35□□□□□ -1.23
SMARCD2-209ENST00000581832 M0R378 163 aa7.35□□□□□ -1.23
SMARCD2-209ENST00000581832 DPM2O94777 84 aa7.35□□□□□ -1.23
SMARCD2-209ENST00000581832 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
SMARCD2-209ENST00000581832 TMEM126AQ9H061 195 aa7.35□□□□□ -1.23
SMARCD2-209ENST00000581832 A0A087X002 238 aa7.34□□□□□ -1.23
SMARCD2-209ENST00000581832 LOC107984156A0A0G2JMH3 177 aa7.34□□□□□ -1.23
SMARCD2-209ENST00000581832 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
SMARCD2-209ENST00000581832 IGKCP01834 107 aa7.34□□□□□ -1.23
SMARCD2-209ENST00000581832 ARL17AQ8IVW1 177 aa7.34□□□□□ -1.23
SMARCD2-209ENST00000581832 LPAP08519 4548 aa7.33□□□□□ -1.24
SMARCD2-209ENST00000581832 J3QQQ9 107 aa7.33□□□□□ -1.24
SMARCD2-209ENST00000581832 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
SMARCD2-209ENST00000581832 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
SMARCD2-209ENST00000581832 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
SMARCD2-209ENST00000581832 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
SMARCD2-209ENST00000581832 RPL13AP40429 203 aaKnown RBP7.32□□□□□ -1.24
SMARCD2-209ENST00000581832 UBE2AP49459 152 aa7.32□□□□□ -1.24
SMARCD2-209ENST00000581832 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
SMARCD2-209ENST00000581832 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
SMARCD2-209ENST00000581832 PRLHP81277 87 aa7.31□□□□□ -1.24
SMARCD2-209ENST00000581832 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
SMARCD2-209ENST00000581832 ANAPC11Q9NYG5 84 aa7.31□□□□□ -1.24
SMARCD2-209ENST00000581832 NMUP48645 174 aa7.3□□□□□ -1.24
SMARCD2-209ENST00000581832 LINC01545Q5VT33 79 aa7.3□□□□□ -1.24
SMARCD2-209ENST00000581832 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
SMARCD2-209ENST00000581832 DAND5Q8N907 189 aa7.3□□□□□ -1.24
SMARCD2-209ENST00000581832 IGKV2D-26A0A0A0MRZ7 120 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 E9PLD3 99 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 KRTAP4-16G5E9R7 235 aaPredicted RBP7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 ATP6V1G1O75348 118 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 SPRR1AP35321 89 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 HERVK_113P61574 105 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
SMARCD2-209ENST00000581832 CRYGAP11844 174 aa7.28□□□□□ -1.24
SMARCD2-209ENST00000581832 KCNQ1DNQ9H478 68 aa7.28□□□□□ -1.24
SMARCD2-209ENST00000581832 RNF213Q63HN8 5207 aa7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 NCR3O14931 201 aa7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 LGALS3P17931 250 aaKnown RBP7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 FAM229BQ4G0N7 80 aa7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 ADAMTSL4-AS1Q5T5F5 129 aa7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
SMARCD2-209ENST00000581832 A0A0J9YXY3 114 aa7.26□□□□□ -1.25
SMARCD2-209ENST00000581832 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
SMARCD2-209ENST00000581832 PRYO14603 147 aa7.26□□□□□ -1.25
SMARCD2-209ENST00000581832 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
SMARCD2-209ENST00000581832 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
SMARCD2-209ENST00000581832 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
SMARCD2-209ENST00000581832 TYMSOSQ8TAI1 123 aa7.25□□□□□ -1.25
SMARCD2-209ENST00000581832 LITAFQ99732 161 aa7.25□□□□□ -1.25
SMARCD2-209ENST00000581832 TRBV10-2A0A0K0K1G8 114 aa7.24□□□□□ -1.25
SMARCD2-209ENST00000581832 NDUFC2O95298 119 aa7.24□□□□□ -1.25
SMARCD2-209ENST00000581832 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
SMARCD2-209ENST00000581832 HIGD2AQ9BW72 106 aa7.22□□□□□ -1.25
SMARCD2-209ENST00000581832 TTTY13Q9BZ97 58 aa7.22□□□□□ -1.25
SMARCD2-209ENST00000581832 SMCR5Q8TEV8 140 aa7.21□□□□□ -1.26
SMARCD2-209ENST00000581832 SPRR4Q96PI1 79 aa7.21□□□□□ -1.26
SMARCD2-209ENST00000581832 SPANXB1Q9NS25 103 aaPredicted RBP7.21□□□□□ -1.26
SMARCD2-209ENST00000581832 B5MCH6 92 aa7.2□□□□□ -1.26
SMARCD2-209ENST00000581832 TIMM17BO60830 172 aa7.2□□□□□ -1.26
SMARCD2-209ENST00000581832 TSPAN13O95857 204 aa7.2□□□□□ -1.26
SMARCD2-209ENST00000581832 DDTP30046 118 aa7.2□□□□□ -1.26
SMARCD2-209ENST00000581832 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
SMARCD2-209ENST00000581832 KRTDAPP60985 99 aa7.19□□□□□ -1.26
SMARCD2-209ENST00000581832 NPC2P61916 151 aa7.19□□□□□ -1.26
SMARCD2-209ENST00000581832 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
SMARCD2-209ENST00000581832 LINC00308Q8TCZ7 52 aa7.18□□□□□ -1.26
SMARCD2-209ENST00000581832 Q9BRP9 147 aa7.18□□□□□ -1.26
SMARCD2-209ENST00000581832 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
SMARCD2-209ENST00000581832 ZNF815PA8K554 130 aa7.17□□□□□ -1.26
SMARCD2-209ENST00000581832 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
SMARCD2-209ENST00000581832 S100A1P23297 94 aa7.17□□□□□ -1.26
SMARCD2-209ENST00000581832 ANKRD39Q53RE8 183 aa7.17□□□□□ -1.26
SMARCD2-209ENST00000581832 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
SMARCD2-209ENST00000581832 LINC00483Q53H64 154 aa7.16□□□□□ -1.26
SMARCD2-209ENST00000581832 Q6ZRX8 168 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms