RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 SMCR5Q8TEV8 140 aa6.78□□□□□ -1.32
CSNK1D-218ENST00000581655 LINC00483Q53H64 154 aa6.77□□□□□ -1.33
CSNK1D-218ENST00000581655 SSBP3-AS1Q7Z2R9 100 aa6.77□□□□□ -1.33
CSNK1D-218ENST00000581655 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
CSNK1D-218ENST00000581655 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
CSNK1D-218ENST00000581655 C9orf92A6NGG3 77 aa6.76□□□□□ -1.33
CSNK1D-218ENST00000581655 GAGE2AQ6NT46 116 aa6.76□□□□□ -1.33
CSNK1D-218ENST00000581655 TIMM17AQ99595 171 aa6.76□□□□□ -1.33
CSNK1D-218ENST00000581655 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
CSNK1D-218ENST00000581655 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
CSNK1D-218ENST00000581655 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
CSNK1D-218ENST00000581655 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
CSNK1D-218ENST00000581655 K7EMI3 77 aa6.72□□□□□ -1.33
CSNK1D-218ENST00000581655 TOMM6Q96B49 74 aa6.72□□□□□ -1.33
CSNK1D-218ENST00000581655 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
CSNK1D-218ENST00000581655 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
CSNK1D-218ENST00000581655 PRYO14603 147 aa6.71□□□□□ -1.34
CSNK1D-218ENST00000581655 COX17Q14061 63 aa6.71□□□□□ -1.34
CSNK1D-218ENST00000581655 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
CSNK1D-218ENST00000581655 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 ADCYAP1P18509 176 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 G0S2P27469 103 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 SPRR1AP35321 89 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 ERASQ7Z444 233 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 MRPL18Q9H0U6 180 aaKnown RBP6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 NXT2Q9NPJ8 142 aaKnown RBP6.7□□□□□ -1.34
CSNK1D-218ENST00000581655 H3BRM9 83 aa6.69□□□□□ -1.34
CSNK1D-218ENST00000581655 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
CSNK1D-218ENST00000581655 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
CSNK1D-218ENST00000581655 CFC1P0CG37 223 aa6.68□□□□□ -1.34
CSNK1D-218ENST00000581655 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
CSNK1D-218ENST00000581655 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
CSNK1D-218ENST00000581655 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
CSNK1D-218ENST00000581655 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
CSNK1D-218ENST00000581655 SYNE2Q8WXH0 6885 aaKnown RBP6.66□□□□□ -1.34
CSNK1D-218ENST00000581655 C9JQL5 133 aa6.66□□□□□ -1.34
CSNK1D-218ENST00000581655 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
CSNK1D-218ENST00000581655 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.35
CSNK1D-218ENST00000581655 NCR3O14931 201 aa6.64□□□□□ -1.35
CSNK1D-218ENST00000581655 LINC00158P58513 81 aa6.64□□□□□ -1.35
CSNK1D-218ENST00000581655 PMVKQ15126 192 aa6.64□□□□□ -1.35
CSNK1D-218ENST00000581655 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
CSNK1D-218ENST00000581655 A0A0U1RRA0 63 aa6.63□□□□□ -1.35
CSNK1D-218ENST00000581655 B5MCH6 92 aa6.63□□□□□ -1.35
CSNK1D-218ENST00000581655 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
CSNK1D-218ENST00000581655 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
CSNK1D-218ENST00000581655 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
CSNK1D-218ENST00000581655 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
CSNK1D-218ENST00000581655 IFITM2Q01629 132 aa6.61□□□□□ -1.35
CSNK1D-218ENST00000581655 Q6Q795 121 aa6.61□□□□□ -1.35
CSNK1D-218ENST00000581655 HRCT1Q6UXD1 115 aa6.61□□□□□ -1.35
CSNK1D-218ENST00000581655 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
CSNK1D-218ENST00000581655 Q9BRP9 147 aa6.61□□□□□ -1.35
CSNK1D-218ENST00000581655 TRAV9-1A0A075B6T8 112 aa6.6□□□□□ -1.35
CSNK1D-218ENST00000581655 IGLC3P0DOY3 106 aa6.6□□□□□ -1.35
CSNK1D-218ENST00000581655 SFTA2Q6UW10 78 aa6.59□□□□□ -1.35
CSNK1D-218ENST00000581655 LINC01549A6NIU2 74 aa6.58□□□□□ -1.36
CSNK1D-218ENST00000581655 S100A12P80511 92 aa6.58□□□□□ -1.36
CSNK1D-218ENST00000581655 KIAA1644Q3SXP7 199 aa6.57□□□□□ -1.36
CSNK1D-218ENST00000581655 Q6ZRX8 168 aa6.57□□□□□ -1.36
CSNK1D-218ENST00000581655 ATP6V1G1O75348 118 aa6.56□□□□□ -1.36
CSNK1D-218ENST00000581655 NDUFA6P56556 154 aa6.56□□□□□ -1.36
CSNK1D-218ENST00000581655 PEA15Q15121 130 aa6.56□□□□□ -1.36
CSNK1D-218ENST00000581655 LCE2BO14633 110 aa6.55□□□□□ -1.36
CSNK1D-218ENST00000581655 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
CSNK1D-218ENST00000581655 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
CSNK1D-218ENST00000581655 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
CSNK1D-218ENST00000581655 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CSNK1D-218ENST00000581655 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
CSNK1D-218ENST00000581655 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
CSNK1D-218ENST00000581655 DDTP30046 118 aa6.52□□□□□ -1.37
CSNK1D-218ENST00000581655 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
CSNK1D-218ENST00000581655 JOSD1Q15040 202 aaPredicted RBP6.5□□□□□ -1.37
CSNK1D-218ENST00000581655 H7C2G1 150 aa6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 MT2AP02795 61 aa6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 CLLU1Q5K131 121 aa6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 FA2HQ7L5A8 372 aa6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 CHTOPQ9Y3Y2 248 aaKnown RBP6.49□□□□□ -1.37
CSNK1D-218ENST00000581655 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
CSNK1D-218ENST00000581655 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
CSNK1D-218ENST00000581655 SMCO4Q9NRQ5 59 aa6.48□□□□□ -1.37
CSNK1D-218ENST00000581655 A0A096LNJ9 63 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 TRBV10-2A0A0K0K1G8 114 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 SPRR1BP22528 89 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 CD164Q04900 197 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 COMMD7Q86VX2 200 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 BAGE3Q86Y29 109 aa6.46□□□□□ -1.38
CSNK1D-218ENST00000581655 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
CSNK1D-218ENST00000581655 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
CSNK1D-218ENST00000581655 TRAV23DV6A0A075B6W5 121 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 MT1FP04733 61 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 Q5XG85 94 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
CSNK1D-218ENST00000581655 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms