RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 DNAH6Q9C0G6 4158 aa9.14□□□□□ -0.95
CDK5RAP3-219ENST00000580670 CXCL5P42830 114 aa9.14□□□□□ -0.95
CDK5RAP3-219ENST00000580670 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
CDK5RAP3-219ENST00000580670 LECT2O14960 151 aa9.13□□□□□ -0.95
CDK5RAP3-219ENST00000580670 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-219ENST00000580670 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 HERV-K104P63124 156 aa9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 TRIAP1O43715 76 aa9.12□□□□□ -0.95
CDK5RAP3-219ENST00000580670 H3BT86 120 aa9.11□□□□□ -0.95
CDK5RAP3-219ENST00000580670 TIMM17BO60830 172 aa9.11□□□□□ -0.95
CDK5RAP3-219ENST00000580670 C1orf134Q5TEV5 83 aa9.11□□□□□ -0.95
CDK5RAP3-219ENST00000580670 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 Q1RN00 199 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 MEIG1Q5JSS6 88 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 CAMK2N2Q96S95 79 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
CDK5RAP3-219ENST00000580670 SNCGO76070 127 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 C10orf25Q5T742 122 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 C2orf48Q96LS8 159 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 H7C2G1 150 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 IFITM1P13164 125 aa9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-219ENST00000580670 COX6CP09669 75 aa9.08□□□□□ -0.96
CDK5RAP3-219ENST00000580670 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
CDK5RAP3-219ENST00000580670 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 LCE6AA0A183 80 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 FAM240AA0A1B0GVK7 77 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 F8WDY8 70 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 LST1O00453 97 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 PFN2P35080 140 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 C9orf116Q5BN46 136 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 Q6ZRU5 148 aa9.07□□□□□ -0.96
CDK5RAP3-219ENST00000580670 LINC00158P58513 81 aa9.06□□□□□ -0.96
CDK5RAP3-219ENST00000580670 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
CDK5RAP3-219ENST00000580670 DAND5Q8N907 189 aa9.05□□□□□ -0.96
CDK5RAP3-219ENST00000580670 SLPIP03973 132 aa9.04□□□□□ -0.96
CDK5RAP3-219ENST00000580670 COX17Q14061 63 aa9.03□□□□□ -0.96
CDK5RAP3-219ENST00000580670 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-219ENST00000580670 A0A087WTM6 91 aa9.02□□□□□ -0.97
CDK5RAP3-219ENST00000580670 MIR7-3HGQ8N6C7 128 aa9.02□□□□□ -0.97
CDK5RAP3-219ENST00000580670 NPC2P61916 151 aa9.01□□□□□ -0.97
CDK5RAP3-219ENST00000580670 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
CDK5RAP3-219ENST00000580670 Q8N814 137 aa9.01□□□□□ -0.97
CDK5RAP3-219ENST00000580670 DNAH2Q9P225 4427 aa9□□□□□ -0.97
CDK5RAP3-219ENST00000580670 RTL8CO15255 209 aa9□□□□□ -0.97
CDK5RAP3-219ENST00000580670 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-219ENST00000580670 TRBV7-7A0A0K0K1E9 115 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 B5MCH6 92 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 SACSQ9NZJ4 4579 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 ACYP1P07311 99 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
CDK5RAP3-219ENST00000580670 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
CDK5RAP3-219ENST00000580670 TNP2Q05952 138 aa8.98□□□□□ -0.97
CDK5RAP3-219ENST00000580670 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
CDK5RAP3-219ENST00000580670 SS18L2Q9UHA2 77 aa8.98□□□□□ -0.97
CDK5RAP3-219ENST00000580670 CCDC179H3BU77 68 aa8.96□□□□□ -0.97
CDK5RAP3-219ENST00000580670 IMUPQ9GZP8 106 aa8.96□□□□□ -0.97
CDK5RAP3-219ENST00000580670 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.97
CDK5RAP3-219ENST00000580670 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.98
CDK5RAP3-219ENST00000580670 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
CDK5RAP3-219ENST00000580670 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-219ENST00000580670 Q6ZRP5 223 aa8.95□□□□□ -0.98
CDK5RAP3-219ENST00000580670 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
CDK5RAP3-219ENST00000580670 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
CDK5RAP3-219ENST00000580670 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
CDK5RAP3-219ENST00000580670 TRACP01848 142 aa8.94□□□□□ -0.98
CDK5RAP3-219ENST00000580670 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
CDK5RAP3-219ENST00000580670 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
CDK5RAP3-219ENST00000580670 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDK5RAP3-219ENST00000580670 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
CDK5RAP3-219ENST00000580670 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
CDK5RAP3-219ENST00000580670 C9orf129Q5T035 196 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-219ENST00000580670 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
CDK5RAP3-219ENST00000580670 HECTD4Q9Y4D8 3996 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 RYR2Q92736 4967 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 A0A096LNI7 61 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 Q8NDZ9 215 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
CDK5RAP3-219ENST00000580670 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-219ENST00000580670 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
CDK5RAP3-219ENST00000580670 NDUFC2O95298 119 aa8.87□□□□□ -0.99
CDK5RAP3-219ENST00000580670 TMEM126AQ9H061 195 aa8.87□□□□□ -0.99
CDK5RAP3-219ENST00000580670 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
CDK5RAP3-219ENST00000580670 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms