RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 HIST1H2BCP62807 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST2H2BEQ16778 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BHQ93079 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BNQ99877 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BMQ99879 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 MAP1LC3CQ9BXW4 147 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 ZNF861PO60384 105 aa15.04■□□□□ -0
CDC42EP4-205ENST00000580315 DPM2O94777 84 aa15.04■□□□□ -0
CDC42EP4-205ENST00000580315 HERV-K104P63124 156 aa15.04■□□□□ -0
CDC42EP4-205ENST00000580315 ATP6V1G1O75348 118 aa15.03■□□□□ -0
CDC42EP4-205ENST00000580315 BCE1O60756 84 aa15.02■□□□□ -0
CDC42EP4-205ENST00000580315 MEIG1Q5JSS6 88 aa15.02■□□□□ -0
CDC42EP4-205ENST00000580315 NDUFA12Q9UI09 145 aa15.02■□□□□ -0
CDC42EP4-205ENST00000580315 MYMXA0A1B0GTQ4 84 aa15.01□□□□□ -0.01
CDC42EP4-205ENST00000580315 LINC00587B1AMM8 73 aa15.01□□□□□ -0.01
CDC42EP4-205ENST00000580315 VPREB1P12018 145 aa15.01□□□□□ -0.01
CDC42EP4-205ENST00000580315 HERVK_113P61574 105 aa15.01□□□□□ -0.01
CDC42EP4-205ENST00000580315 A0A0U1RRA0 63 aa15□□□□□ -0.01
CDC42EP4-205ENST00000580315 IGKCP01834 107 aa15□□□□□ -0.01
CDC42EP4-205ENST00000580315 RPL28P46779 137 aaKnown RBP15□□□□□ -0.01
CDC42EP4-205ENST00000580315 PLEKHB2Q96CS7 222 aa15□□□□□ -0.01
CDC42EP4-205ENST00000580315 PMCHL2Q9BQD1 86 aa15□□□□□ -0.01
CDC42EP4-205ENST00000580315 LEPROTO15243 131 aa14.99□□□□□ -0.01
CDC42EP4-205ENST00000580315 SMIM13P0DJ93 91 aa14.98□□□□□ -0.01
CDC42EP4-205ENST00000580315 IGKV2-28A0A075B6P5 120 aa14.97□□□□□ -0.01
CDC42EP4-205ENST00000580315 IGKV2D-28P01615 120 aa14.97□□□□□ -0.01
CDC42EP4-205ENST00000580315 IGLV1-50A0A075B6I6 118 aa14.94□□□□□ -0.02
CDC42EP4-205ENST00000580315 J3QQQ9 107 aa14.94□□□□□ -0.02
CDC42EP4-205ENST00000580315 PRR26Q8N8Z3 221 aa14.94□□□□□ -0.02
CDC42EP4-205ENST00000580315 KRTAP1-4P0C5Y4 121 aa14.93□□□□□ -0.02
CDC42EP4-205ENST00000580315 UBE2AP49459 152 aa14.93□□□□□ -0.02
CDC42EP4-205ENST00000580315 TSPEAR-AS2P59090 65 aa14.93□□□□□ -0.02
CDC42EP4-205ENST00000580315 MIR7-3HGQ8N6C7 128 aa14.93□□□□□ -0.02
CDC42EP4-205ENST00000580315 SYS1-DBNDD2H3BUS1 97 aa14.92□□□□□ -0.02
CDC42EP4-205ENST00000580315 LGALS3P17931 250 aaKnown RBP14.92□□□□□ -0.02
CDC42EP4-205ENST00000580315 NMUP48645 174 aa14.92□□□□□ -0.02
CDC42EP4-205ENST00000580315 Q8NDZ9 215 aa14.92□□□□□ -0.02
CDC42EP4-205ENST00000580315 BOD1L2Q8IYS8 172 aa14.9□□□□□ -0.02
CDC42EP4-205ENST00000580315 M0R378 163 aa14.89□□□□□ -0.03
CDC42EP4-205ENST00000580315 RPL13AP40429 203 aaKnown RBP14.88□□□□□ -0.03
CDC42EP4-205ENST00000580315 TMEM126AQ9H061 195 aa14.88□□□□□ -0.03
CDC42EP4-205ENST00000580315 COA6Q5JTJ3 125 aaKnown RBP14.87□□□□□ -0.03
CDC42EP4-205ENST00000580315 PET117Q6UWS5 81 aa14.87□□□□□ -0.03
CDC42EP4-205ENST00000580315 TMEM238C9JI98 176 aa14.86□□□□□ -0.03
CDC42EP4-205ENST00000580315 FAM19A1Q7Z5A9 133 aa14.85□□□□□ -0.03
CDC42EP4-205ENST00000580315 KRTAP13-1Q8IUC0 172 aa14.85□□□□□ -0.03
CDC42EP4-205ENST00000580315 LPAP08519 4548 aa14.85□□□□□ -0.03
CDC42EP4-205ENST00000580315 E9PLD3 99 aa14.84□□□□□ -0.03
CDC42EP4-205ENST00000580315 LINC01545Q5VT33 79 aa14.84□□□□□ -0.03
CDC42EP4-205ENST00000580315 IGKV2D-26A0A0A0MRZ7 120 aa14.83□□□□□ -0.04
CDC42EP4-205ENST00000580315 NCR3O14931 201 aa14.81□□□□□ -0.04
CDC42EP4-205ENST00000580315 S100A1P23297 94 aa14.81□□□□□ -0.04
CDC42EP4-205ENST00000580315 PRLHP81277 87 aa14.81□□□□□ -0.04
CDC42EP4-205ENST00000580315 DAND5Q8N907 189 aa14.81□□□□□ -0.04
CDC42EP4-205ENST00000580315 MIEN1Q9BRT3 115 aa14.8□□□□□ -0.04
CDC42EP4-205ENST00000580315 LOC107984156A0A0G2JMH3 177 aa14.79□□□□□ -0.04
CDC42EP4-205ENST00000580315 C3orf79P0CE67 100 aa14.79□□□□□ -0.04
CDC42EP4-205ENST00000580315 ARL17AQ8IVW1 177 aa14.79□□□□□ -0.04
CDC42EP4-205ENST00000580315 KRTDAPP60985 99 aa14.78□□□□□ -0.04
CDC42EP4-205ENST00000580315 PRYO14603 147 aa14.77□□□□□ -0.05
CDC42EP4-205ENST00000580315 A0A0J9YXY3 114 aa14.76□□□□□ -0.05
CDC42EP4-205ENST00000580315 CRYGAP11844 174 aa14.76□□□□□ -0.05
CDC42EP4-205ENST00000580315 S100A12P80511 92 aa14.76□□□□□ -0.05
CDC42EP4-205ENST00000580315 C20orf202A1L168 122 aa14.74□□□□□ -0.05
CDC42EP4-205ENST00000580315 KCNQ1DNQ9H478 68 aa14.73□□□□□ -0.05
CDC42EP4-205ENST00000580315 TRBV10-3A0A0K0K1G6 114 aa14.72□□□□□ -0.05
CDC42EP4-205ENST00000580315 TRBV10-2A0A0K0K1G8 114 aa14.72□□□□□ -0.05
CDC42EP4-205ENST00000580315 A0A087X002 238 aa14.71□□□□□ -0.05
CDC42EP4-205ENST00000580315 HIGD2AQ9BW72 106 aa14.71□□□□□ -0.05
CDC42EP4-205ENST00000580315 SPANXB1Q9NS25 103 aaPredicted RBP14.71□□□□□ -0.05
CDC42EP4-205ENST00000580315 NDUFC2O95298 119 aa14.7□□□□□ -0.06
CDC42EP4-205ENST00000580315 FAM229BQ4G0N7 80 aa14.7□□□□□ -0.06
CDC42EP4-205ENST00000580315 LINC00337Q8N6G1 96 aa14.69□□□□□ -0.06
CDC42EP4-205ENST00000580315 TYMSOSQ8TAI1 123 aa14.69□□□□□ -0.06
CDC42EP4-205ENST00000580315 ANAPC11Q9NYG5 84 aa14.69□□□□□ -0.06
CDC42EP4-205ENST00000580315 ETDCA0A1B0GVM5 59 aa14.68□□□□□ -0.06
CDC42EP4-205ENST00000580315 DDTP30046 118 aa14.68□□□□□ -0.06
CDC42EP4-205ENST00000580315 ADAMTSL4-AS1Q5T5F5 129 aa14.68□□□□□ -0.06
CDC42EP4-205ENST00000580315 ZNF815PA8K554 130 aa14.67□□□□□ -0.06
CDC42EP4-205ENST00000580315 SPRR1AP35321 89 aa14.67□□□□□ -0.06
CDC42EP4-205ENST00000580315 AKR1D1P51857 326 aa14.67□□□□□ -0.06
CDC42EP4-205ENST00000580315 NPC2P61916 151 aa14.67□□□□□ -0.06
CDC42EP4-205ENST00000580315 TIMM17BO60830 172 aa14.66□□□□□ -0.06
CDC42EP4-205ENST00000580315 S100A7L2Q5SY68 101 aa14.65□□□□□ -0.06
CDC42EP4-205ENST00000580315 SOSTDC1Q6X4U4 206 aa14.64□□□□□ -0.07
CDC42EP4-205ENST00000580315 MUC2Q02817 5179 aa14.64□□□□□ -0.07
CDC42EP4-205ENST00000580315 ZNF706Q9Y5V0 76 aaPredicted RBP14.63□□□□□ -0.07
CDC42EP4-205ENST00000580315 S100A2P29034 98 aa14.62□□□□□ -0.07
CDC42EP4-205ENST00000580315 LITAFQ99732 161 aa14.62□□□□□ -0.07
CDC42EP4-205ENST00000580315 KRTAP4-16G5E9R7 235 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP4-205ENST00000580315 IGLV6-57P01721 117 aa14.6□□□□□ -0.07
CDC42EP4-205ENST00000580315 KRTAP13-2Q52LG2 175 aa14.6□□□□□ -0.07
CDC42EP4-205ENST00000580315 LINC00308Q8TCZ7 52 aa14.6□□□□□ -0.07
CDC42EP4-205ENST00000580315 TTTY13Q9BZ97 58 aa14.6□□□□□ -0.07
CDC42EP4-205ENST00000580315 EIF4EBP3O60516 100 aaPredicted RBP14.59□□□□□ -0.07
CDC42EP4-205ENST00000580315 S100A6P06703 90 aa14.58□□□□□ -0.08
CDC42EP4-205ENST00000580315 ATOH7Q8N100 152 aa14.58□□□□□ -0.08
CDC42EP4-205ENST00000580315 HIST3H2BBQ8N257 126 aa14.58□□□□□ -0.08
CDC42EP4-205ENST00000580315 SPRR4Q96PI1 79 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms