RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
SUPT4H1-202ENST00000577396 M0QXV9 152 aa12.41□□□□□ -0.42
SUPT4H1-202ENST00000577396 MEIG1Q5JSS6 88 aa12.41□□□□□ -0.42
SUPT4H1-202ENST00000577396 KRTAP11-1Q8IUC1 163 aa12.41□□□□□ -0.42
SUPT4H1-202ENST00000577396 ANKRD39Q53RE8 183 aa12.4□□□□□ -0.42
SUPT4H1-202ENST00000577396 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
SUPT4H1-202ENST00000577396 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
SUPT4H1-202ENST00000577396 TP73-AS1Q9UF72 201 aa12.39□□□□□ -0.43
SUPT4H1-202ENST00000577396 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 Q8NDZ9 215 aa12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 MYCBP2O75592 4640 aa12.38□□□□□ -0.43
SUPT4H1-202ENST00000577396 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
SUPT4H1-202ENST00000577396 SVIPQ8NHG7 77 aa12.37□□□□□ -0.43
SUPT4H1-202ENST00000577396 PSORS1C2Q9UIG4 136 aa12.37□□□□□ -0.43
SUPT4H1-202ENST00000577396 FLG2Q5D862 2391 aaPredicted RBP12.36□□□□□ -0.43
SUPT4H1-202ENST00000577396 VPREB1P12018 145 aa12.36□□□□□ -0.43
SUPT4H1-202ENST00000577396 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
SUPT4H1-202ENST00000577396 LBHQ53QV2 105 aaPredicted RBP12.34□□□□□ -0.43
SUPT4H1-202ENST00000577396 DAND5Q8N907 189 aa12.34□□□□□ -0.43
SUPT4H1-202ENST00000577396 PKHD1L1Q86WI1 4243 aa12.34□□□□□ -0.43
SUPT4H1-202ENST00000577396 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.43
SUPT4H1-202ENST00000577396 ZNF815PA8K554 130 aa12.33□□□□□ -0.43
SUPT4H1-202ENST00000577396 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.43
SUPT4H1-202ENST00000577396 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.43
SUPT4H1-202ENST00000577396 LINC00167Q96N53 147 aa12.33□□□□□ -0.43
SUPT4H1-202ENST00000577396 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
SUPT4H1-202ENST00000577396 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-202ENST00000577396 UBE2BP63146 152 aa12.32□□□□□ -0.44
SUPT4H1-202ENST00000577396 LITAFQ99732 161 aa12.32□□□□□ -0.44
SUPT4H1-202ENST00000577396 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
SUPT4H1-202ENST00000577396 NKAPP1Q8N9T2 125 aa12.3□□□□□ -0.44
SUPT4H1-202ENST00000577396 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
SUPT4H1-202ENST00000577396 TIMM17BO60830 172 aa12.29□□□□□ -0.44
SUPT4H1-202ENST00000577396 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
SUPT4H1-202ENST00000577396 BOD1L2Q8IYS8 172 aa12.29□□□□□ -0.44
SUPT4H1-202ENST00000577396 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
SUPT4H1-202ENST00000577396 C1orf137Q5JT78 98 aa12.29□□□□□ -0.44
SUPT4H1-202ENST00000577396 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
SUPT4H1-202ENST00000577396 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
SUPT4H1-202ENST00000577396 HSBP1L1C9JCN9 74 aa12.26□□□□□ -0.45
SUPT4H1-202ENST00000577396 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-202ENST00000577396 SOSTDC1Q6X4U4 206 aa12.26□□□□□ -0.45
SUPT4H1-202ENST00000577396 FAT3Q8TDW7 4589 aa12.25□□□□□ -0.45
SUPT4H1-202ENST00000577396 IGLV1-50A0A075B6I6 118 aa12.25□□□□□ -0.45
SUPT4H1-202ENST00000577396 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
SUPT4H1-202ENST00000577396 M0R378 163 aa12.23□□□□□ -0.45
SUPT4H1-202ENST00000577396 SPINK6Q6UWN8 80 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 SCGB1D4Q6XE38 83 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 NPC2P61916 151 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
SUPT4H1-202ENST00000577396 NDUFC2O95298 119 aa12.21□□□□□ -0.46
SUPT4H1-202ENST00000577396 NCR3O14931 201 aa12.19□□□□□ -0.46
SUPT4H1-202ENST00000577396 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
SUPT4H1-202ENST00000577396 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
SUPT4H1-202ENST00000577396 TMEM238LA0A1B0GVL6 79 aa12.19□□□□□ -0.46
SUPT4H1-202ENST00000577396 PYY3Q5JQD4 70 aa12.19□□□□□ -0.46
SUPT4H1-202ENST00000577396 TRBV10-2A0A0K0K1G8 114 aa12.18□□□□□ -0.46
SUPT4H1-202ENST00000577396 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
SUPT4H1-202ENST00000577396 BCE1O60756 84 aa12.18□□□□□ -0.46
SUPT4H1-202ENST00000577396 TMEM126AQ9H061 195 aa12.16□□□□□ -0.46
SUPT4H1-202ENST00000577396 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
SUPT4H1-202ENST00000577396 KRTAP29-1A8MX34 341 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-202ENST00000577396 COX8AP10176 69 aa12.15□□□□□ -0.46
SUPT4H1-202ENST00000577396 Q6ZVH6 145 aa12.15□□□□□ -0.46
SUPT4H1-202ENST00000577396 ZNF861PO60384 105 aa12.15□□□□□ -0.47
SUPT4H1-202ENST00000577396 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.47
SUPT4H1-202ENST00000577396 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.47
SUPT4H1-202ENST00000577396 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
SUPT4H1-202ENST00000577396 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
SUPT4H1-202ENST00000577396 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
SUPT4H1-202ENST00000577396 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
SUPT4H1-202ENST00000577396 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
SUPT4H1-202ENST00000577396 VAMP8Q9BV40 100 aa12.13□□□□□ -0.47
SUPT4H1-202ENST00000577396 DLEU1O43261 78 aa12.12□□□□□ -0.47
SUPT4H1-202ENST00000577396 OXTP01178 125 aa12.12□□□□□ -0.47
SUPT4H1-202ENST00000577396 IFITM1P13164 125 aa12.12□□□□□ -0.47
SUPT4H1-202ENST00000577396 IGLV6-57P01721 117 aa12.11□□□□□ -0.47
SUPT4H1-202ENST00000577396 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
SUPT4H1-202ENST00000577396 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
SUPT4H1-202ENST00000577396 H0Y9J4 135 aa12.11□□□□□ -0.47
SUPT4H1-202ENST00000577396 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
SUPT4H1-202ENST00000577396 DDTP30046 118 aa12.1□□□□□ -0.47
SUPT4H1-202ENST00000577396 SPRR1AP35321 89 aa12.1□□□□□ -0.47
SUPT4H1-202ENST00000577396 PRYO14603 147 aa12.09□□□□□ -0.47
SUPT4H1-202ENST00000577396 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-202ENST00000577396 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
SUPT4H1-202ENST00000577396 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
SUPT4H1-202ENST00000577396 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
SUPT4H1-202ENST00000577396 HERC1Q15751 4861 aa12.07□□□□□ -0.48
SUPT4H1-202ENST00000577396 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
SUPT4H1-202ENST00000577396 FAM19A1Q7Z5A9 133 aa12.07□□□□□ -0.48
SUPT4H1-202ENST00000577396 UBE2AP49459 152 aa12.06□□□□□ -0.48
SUPT4H1-202ENST00000577396 LINC00518Q8N0U6 118 aa12.06□□□□□ -0.48
SUPT4H1-202ENST00000577396 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms