RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
PCDHGB3-201ENST00000576222 HCG22E2RYF7 251 aa9.02□□□□□ -0.97
PCDHGB3-201ENST00000576222 IGHV4-30-4P0DP06 118 aa9.02□□□□□ -0.97
PCDHGB3-201ENST00000576222 FASNP49327 2511 aaKnown RBP9.01□□□□□ -0.97
PCDHGB3-201ENST00000576222 KIAA0087Q14695 138 aa9.01□□□□□ -0.97
PCDHGB3-201ENST00000576222 ACANP16112 2415 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 A0A087WSZ3 146 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 C9orf129Q5T035 196 aaKnown RBP9□□□□□ -0.97
PCDHGB3-201ENST00000576222 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 DEFB116Q30KQ4 102 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 C6orf48Q9UBA6 75 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 SEC61GP60059 68 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 CASC2Q6XLA1 102 aa9□□□□□ -0.97
PCDHGB3-201ENST00000576222 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
PCDHGB3-201ENST00000576222 H0Y9P7 68 aa8.98□□□□□ -0.97
PCDHGB3-201ENST00000576222 KLKP1Q107X0 134 aa8.98□□□□□ -0.97
PCDHGB3-201ENST00000576222 INAFM1C9JVW0 142 aa8.98□□□□□ -0.97
PCDHGB3-201ENST00000576222 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
PCDHGB3-201ENST00000576222 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
PCDHGB3-201ENST00000576222 C16orf95Q9H693 158 aa8.97□□□□□ -0.97
PCDHGB3-201ENST00000576222 F8WDY8 70 aa8.97□□□□□ -0.97
PCDHGB3-201ENST00000576222 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
PCDHGB3-201ENST00000576222 H7BZZ5 65 aa8.96□□□□□ -0.97
PCDHGB3-201ENST00000576222 TRANK1O15050 2925 aa8.96□□□□□ -0.98
PCDHGB3-201ENST00000576222 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
PCDHGB3-201ENST00000576222 Q6ZTC4 211 aa8.95□□□□□ -0.98
PCDHGB3-201ENST00000576222 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
PCDHGB3-201ENST00000576222 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
PCDHGB3-201ENST00000576222 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
PCDHGB3-201ENST00000576222 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
PCDHGB3-201ENST00000576222 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
PCDHGB3-201ENST00000576222 A0A1B0GW54 56 aa8.93□□□□□ -0.98
PCDHGB3-201ENST00000576222 RETNQ9HD89 108 aa8.93□□□□□ -0.98
PCDHGB3-201ENST00000576222 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
PCDHGB3-201ENST00000576222 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
PCDHGB3-201ENST00000576222 Q9BRP9 147 aa8.92□□□□□ -0.98
PCDHGB3-201ENST00000576222 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
PCDHGB3-201ENST00000576222 IL17DQ8TAD2 202 aa8.92□□□□□ -0.98
PCDHGB3-201ENST00000576222 UNC80Q8N2C7 3258 aa8.91□□□□□ -0.98
PCDHGB3-201ENST00000576222 IGLV9-49A0A0B4J1Y8 123 aa8.91□□□□□ -0.98
PCDHGB3-201ENST00000576222 X6R8D5 127 aa8.91□□□□□ -0.98
PCDHGB3-201ENST00000576222 F8P00451 2351 aa8.91□□□□□ -0.98
PCDHGB3-201ENST00000576222 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
PCDHGB3-201ENST00000576222 Q8NBF4 154 aa8.9□□□□□ -0.98
PCDHGB3-201ENST00000576222 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.99
PCDHGB3-201ENST00000576222 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
PCDHGB3-201ENST00000576222 FAM104AQ969W3 186 aa8.88□□□□□ -0.99
PCDHGB3-201ENST00000576222 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
PCDHGB3-201ENST00000576222 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
PCDHGB3-201ENST00000576222 PRLHP81277 87 aa8.87□□□□□ -0.99
PCDHGB3-201ENST00000576222 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
PCDHGB3-201ENST00000576222 SMR3AQ99954 134 aa8.86□□□□□ -0.99
PCDHGB3-201ENST00000576222 VPREB1P12018 145 aa8.86□□□□□ -0.99
PCDHGB3-201ENST00000576222 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
PCDHGB3-201ENST00000576222 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
PCDHGB3-201ENST00000576222 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
PCDHGB3-201ENST00000576222 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
PCDHGB3-201ENST00000576222 Q6ZRX8 168 aa8.84□□□□□ -0.99
PCDHGB3-201ENST00000576222 WIPF1O43516 503 aa8.84□□□□□ -0.99
PCDHGB3-201ENST00000576222 FSHBP01225 129 aa8.84□□□□□ -0.99
PCDHGB3-201ENST00000576222 EPG5Q9HCE0 2579 aa8.83□□□□□ -1
PCDHGB3-201ENST00000576222 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
PCDHGB3-201ENST00000576222 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
PCDHGB3-201ENST00000576222 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
PCDHGB3-201ENST00000576222 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
PCDHGB3-201ENST00000576222 LINC00476Q8WZB0 136 aa8.81□□□□□ -1
PCDHGB3-201ENST00000576222 M0R2N4 97 aa8.8□□□□□ -1
PCDHGB3-201ENST00000576222 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
PCDHGB3-201ENST00000576222 A8MUN3 132 aa8.79□□□□□ -1
PCDHGB3-201ENST00000576222 H3BPC8 53 aa8.79□□□□□ -1
PCDHGB3-201ENST00000576222 TRIOO75962 3097 aa8.79□□□□□ -1
PCDHGB3-201ENST00000576222 Q6ZRP5 223 aa8.79□□□□□ -1
PCDHGB3-201ENST00000576222 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
PCDHGB3-201ENST00000576222 K7EQZ3 153 aa8.78□□□□□ -1
PCDHGB3-201ENST00000576222 VPS13AQ96RL7 3174 aa8.76□□□□□ -1.01
PCDHGB3-201ENST00000576222 PRUNE2Q8WUY3 3088 aa8.76□□□□□ -1.01
PCDHGB3-201ENST00000576222 Q8NAQ8 132 aa8.75□□□□□ -1.01
PCDHGB3-201ENST00000576222 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
PCDHGB3-201ENST00000576222 H3BNG1 76 aa8.74□□□□□ -1.01
PCDHGB3-201ENST00000576222 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
PCDHGB3-201ENST00000576222 MGAQ8IWI9 3026 aa8.74□□□□□ -1.01
PCDHGB3-201ENST00000576222 NBEAQ8NFP9 2946 aa8.74□□□□□ -1.01
PCDHGB3-201ENST00000576222 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 KCNQ1DNQ9H478 68 aa8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 TP53AIP1Q9HCN2 124 aa8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 Q5XG85 94 aa8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 WDFY4Q6ZS81 3184 aa8.73□□□□□ -1.01
PCDHGB3-201ENST00000576222 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
PCDHGB3-201ENST00000576222 Q8N377 158 aa8.72□□□□□ -1.01
PCDHGB3-201ENST00000576222 XIRP2A4UGR9 3374 aa8.72□□□□□ -1.01
PCDHGB3-201ENST00000576222 A0A096LNT2 108 aa8.72□□□□□ -1.01
PCDHGB3-201ENST00000576222 K7ERS5 55 aa8.72□□□□□ -1.01
PCDHGB3-201ENST00000576222 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
PCDHGB3-201ENST00000576222 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
PCDHGB3-201ENST00000576222 FLNBO75369 2602 aaKnown RBP8.69□□□□□ -1.02
PCDHGB3-201ENST00000576222 DSPP15924 2871 aaKnown RBP8.69□□□□□ -1.02
PCDHGB3-201ENST00000576222 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
PCDHGB3-201ENST00000576222 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
PCDHGB3-201ENST00000576222 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms