RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 ATP5LO75964 103 aa5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 PFN2P35080 140 aa5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 RPL24P83731 157 aaKnown RBP5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 CST9LQ9H4G1 147 aa5.55□□□□□ -1.52
CALCOCO2-227ENST00000575560 A0A1B0GVG6 124 aa5.54□□□□□ -1.52
CALCOCO2-227ENST00000575560 RAB14P61106 215 aa5.54□□□□□ -1.52
CALCOCO2-227ENST00000575560 MT1HP80294 61 aa5.54□□□□□ -1.52
CALCOCO2-227ENST00000575560 IGLV5-39A0A0G2JS06 123 aa5.53□□□□□ -1.52
CALCOCO2-227ENST00000575560 COX17Q14061 63 aa5.53□□□□□ -1.52
CALCOCO2-227ENST00000575560 Q8N377 158 aa5.52□□□□□ -1.53
CALCOCO2-227ENST00000575560 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
CALCOCO2-227ENST00000575560 ERG28Q9UKR5 140 aa5.52□□□□□ -1.53
CALCOCO2-227ENST00000575560 ZNF706Q9Y5V0 76 aaPredicted RBP5.52□□□□□ -1.53
CALCOCO2-227ENST00000575560 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 H3BRM9 83 aa5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 PMVKQ15126 192 aa5.51□□□□□ -1.53
CALCOCO2-227ENST00000575560 NDUFA5Q16718 116 aa5.5□□□□□ -1.53
CALCOCO2-227ENST00000575560 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
CALCOCO2-227ENST00000575560 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
CALCOCO2-227ENST00000575560 ANAPC16Q96DE5 110 aa5.5□□□□□ -1.53
CALCOCO2-227ENST00000575560 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
CALCOCO2-227ENST00000575560 ATP6V1G1O75348 118 aa5.49□□□□□ -1.53
CALCOCO2-227ENST00000575560 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
CALCOCO2-227ENST00000575560 SMCR5Q8TEV8 140 aa5.49□□□□□ -1.53
CALCOCO2-227ENST00000575560 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
CALCOCO2-227ENST00000575560 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 SLC25A20O43772 301 aa5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 SPRR1AP35321 89 aa5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 KIAA1644Q3SXP7 199 aa5.48□□□□□ -1.53
CALCOCO2-227ENST00000575560 S100A1P23297 94 aa5.47□□□□□ -1.53
CALCOCO2-227ENST00000575560 ANKRD39Q53RE8 183 aa5.47□□□□□ -1.53
CALCOCO2-227ENST00000575560 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
CALCOCO2-227ENST00000575560 PRYO14603 147 aa5.46□□□□□ -1.54
CALCOCO2-227ENST00000575560 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
CALCOCO2-227ENST00000575560 KCNQ1DNQ9H478 68 aa5.46□□□□□ -1.54
CALCOCO2-227ENST00000575560 MOBPQ13875 183 aa5.45□□□□□ -1.54
CALCOCO2-227ENST00000575560 GAGE2AQ6NT46 116 aa5.45□□□□□ -1.54
CALCOCO2-227ENST00000575560 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
CALCOCO2-227ENST00000575560 LINC00158P58513 81 aa5.44□□□□□ -1.54
CALCOCO2-227ENST00000575560 IGLV8-61A0A075B6I0 122 aa5.43□□□□□ -1.54
CALCOCO2-227ENST00000575560 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
CALCOCO2-227ENST00000575560 ETDCA0A1B0GVM5 59 aa5.43□□□□□ -1.54
CALCOCO2-227ENST00000575560 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
CALCOCO2-227ENST00000575560 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
CALCOCO2-227ENST00000575560 B5MCH6 92 aa5.42□□□□□ -1.54
CALCOCO2-227ENST00000575560 NDUFA6P56556 154 aa5.42□□□□□ -1.54
CALCOCO2-227ENST00000575560 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
CALCOCO2-227ENST00000575560 A0A096LNJ9 63 aa5.41□□□□□ -1.54
CALCOCO2-227ENST00000575560 A0A0U1RRA0 63 aa5.41□□□□□ -1.54
CALCOCO2-227ENST00000575560 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
CALCOCO2-227ENST00000575560 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
CALCOCO2-227ENST00000575560 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.54
CALCOCO2-227ENST00000575560 NCR3O14931 201 aa5.4□□□□□ -1.54
CALCOCO2-227ENST00000575560 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
CALCOCO2-227ENST00000575560 SMCO4Q9NRQ5 59 aa5.4□□□□□ -1.54
CALCOCO2-227ENST00000575560 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
CALCOCO2-227ENST00000575560 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
CALCOCO2-227ENST00000575560 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
CALCOCO2-227ENST00000575560 TMEM170BQ5T4T1 132 aa5.39□□□□□ -1.55
CALCOCO2-227ENST00000575560 Q9BRP9 147 aa5.39□□□□□ -1.55
CALCOCO2-227ENST00000575560 BAGE3Q86Y29 109 aa5.38□□□□□ -1.55
CALCOCO2-227ENST00000575560 M0R2T5 61 aa5.37□□□□□ -1.55
CALCOCO2-227ENST00000575560 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
CALCOCO2-227ENST00000575560 MIR7-3HGQ8N6C7 128 aa5.37□□□□□ -1.55
CALCOCO2-227ENST00000575560 URB1-AS1Q96HZ7 61 aa5.37□□□□□ -1.55
CALCOCO2-227ENST00000575560 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
CALCOCO2-227ENST00000575560 Q6ZRX8 168 aa5.36□□□□□ -1.55
CALCOCO2-227ENST00000575560 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
CALCOCO2-227ENST00000575560 LINC00614P0C842 121 aa5.35□□□□□ -1.55
CALCOCO2-227ENST00000575560 S100A12P80511 92 aa5.35□□□□□ -1.55
CALCOCO2-227ENST00000575560 FABP9Q0Z7S8 132 aa5.35□□□□□ -1.55
CALCOCO2-227ENST00000575560 LOC107984156A0A0G2JMH3 177 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 HBDP02042 147 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 PMCHL1Q16048 86 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 C9orf153Q5TBE3 101 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 ARL17AQ8IVW1 177 aa5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 CHTOPQ9Y3Y2 248 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-227ENST00000575560 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
CALCOCO2-227ENST00000575560 LINC00587B1AMM8 73 aa5.33□□□□□ -1.56
CALCOCO2-227ENST00000575560 DDTP30046 118 aa5.33□□□□□ -1.56
CALCOCO2-227ENST00000575560 HERV-K104P63124 156 aa5.33□□□□□ -1.56
CALCOCO2-227ENST00000575560 COX19Q49B96 90 aa5.33□□□□□ -1.56
CALCOCO2-227ENST00000575560 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
CALCOCO2-227ENST00000575560 S100PP25815 95 aa5.32□□□□□ -1.56
CALCOCO2-227ENST00000575560 C18orf32Q8TCD1 76 aa5.32□□□□□ -1.56
CALCOCO2-227ENST00000575560 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
CALCOCO2-227ENST00000575560 USH2AO75445 5202 aa5.32□□□□□ -1.56
CALCOCO2-227ENST00000575560 C5orf52A6NGY3 159 aa5.31□□□□□ -1.56
CALCOCO2-227ENST00000575560 IGLV6-57P01721 117 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms