RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 NDUFA12Q9UI09 145 aa12.64□□□□□ -0.39
HCFC1R1-208ENST00000575214 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
HCFC1R1-208ENST00000575214 HERVK_113P61574 105 aa12.63□□□□□ -0.39
HCFC1R1-208ENST00000575214 DIRC1Q969H9 104 aa12.63□□□□□ -0.39
HCFC1R1-208ENST00000575214 RPL37AP8A6NKH3 93 aa12.62□□□□□ -0.39
HCFC1R1-208ENST00000575214 HERV-K104P63124 156 aa12.62□□□□□ -0.39
HCFC1R1-208ENST00000575214 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
HCFC1R1-208ENST00000575214 LEPROTO15243 131 aa12.61□□□□□ -0.39
HCFC1R1-208ENST00000575214 S100A1P23297 94 aa12.61□□□□□ -0.39
HCFC1R1-208ENST00000575214 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
HCFC1R1-208ENST00000575214 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
HCFC1R1-208ENST00000575214 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
HCFC1R1-208ENST00000575214 TSPEAR-AS2P59090 65 aa12.6□□□□□ -0.39
HCFC1R1-208ENST00000575214 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
HCFC1R1-208ENST00000575214 SMIM13P0DJ93 91 aa12.59□□□□□ -0.39
HCFC1R1-208ENST00000575214 VPREB1P12018 145 aa12.59□□□□□ -0.39
HCFC1R1-208ENST00000575214 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
HCFC1R1-208ENST00000575214 H0Y9J4 135 aa12.58□□□□□ -0.4
HCFC1R1-208ENST00000575214 J3QQQ9 107 aa12.57□□□□□ -0.4
HCFC1R1-208ENST00000575214 COA6Q5JTJ3 125 aaKnown RBP12.57□□□□□ -0.4
HCFC1R1-208ENST00000575214 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 TNXBP22105 4242 aa12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 IGKV2-28A0A075B6P5 120 aa12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 IGKV2D-28P01615 120 aa12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 LGALS3P17931 250 aaKnown RBP12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
HCFC1R1-208ENST00000575214 ZNF861PO60384 105 aa12.55□□□□□ -0.4
HCFC1R1-208ENST00000575214 BCE1O60756 84 aa12.55□□□□□ -0.4
HCFC1R1-208ENST00000575214 Q8NDZ9 215 aa12.55□□□□□ -0.4
HCFC1R1-208ENST00000575214 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
HCFC1R1-208ENST00000575214 NMUP48645 174 aa12.53□□□□□ -0.4
HCFC1R1-208ENST00000575214 LINC01545Q5VT33 79 aa12.53□□□□□ -0.4
HCFC1R1-208ENST00000575214 C3orf79P0CE67 100 aa12.52□□□□□ -0.41
HCFC1R1-208ENST00000575214 IGLV1-50A0A075B6I6 118 aa12.51□□□□□ -0.41
HCFC1R1-208ENST00000575214 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
HCFC1R1-208ENST00000575214 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
HCFC1R1-208ENST00000575214 BOD1L2Q8IYS8 172 aa12.51□□□□□ -0.41
HCFC1R1-208ENST00000575214 E9PLD3 99 aa12.5□□□□□ -0.41
HCFC1R1-208ENST00000575214 KRTDAPP60985 99 aa12.5□□□□□ -0.41
HCFC1R1-208ENST00000575214 UBE2AP49459 152 aa12.49□□□□□ -0.41
HCFC1R1-208ENST00000575214 DAND5Q8N907 189 aa12.48□□□□□ -0.41
HCFC1R1-208ENST00000575214 M0R378 163 aa12.47□□□□□ -0.41
HCFC1R1-208ENST00000575214 TMEM238C9JI98 176 aa12.46□□□□□ -0.41
HCFC1R1-208ENST00000575214 NCR3O14931 201 aa12.45□□□□□ -0.42
HCFC1R1-208ENST00000575214 KRTAP1-4P0C5Y4 121 aa12.45□□□□□ -0.42
HCFC1R1-208ENST00000575214 PRR26Q8N8Z3 221 aa12.45□□□□□ -0.42
HCFC1R1-208ENST00000575214 TMEM126AQ9H061 195 aa12.45□□□□□ -0.42
HCFC1R1-208ENST00000575214 C20orf202A1L168 122 aa12.43□□□□□ -0.42
HCFC1R1-208ENST00000575214 FAM19A1Q7Z5A9 133 aa12.43□□□□□ -0.42
HCFC1R1-208ENST00000575214 A0A0J9YXY3 114 aa12.43□□□□□ -0.42
HCFC1R1-208ENST00000575214 KRTAP13-1Q8IUC0 172 aa12.43□□□□□ -0.42
HCFC1R1-208ENST00000575214 MIEN1Q9BRT3 115 aa12.43□□□□□ -0.42
HCFC1R1-208ENST00000575214 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
HCFC1R1-208ENST00000575214 PRLHP81277 87 aa12.41□□□□□ -0.42
HCFC1R1-208ENST00000575214 HMCN2Q8NDA2 5059 aa12.4□□□□□ -0.42
HCFC1R1-208ENST00000575214 LOC107984156A0A0G2JMH3 177 aa12.4□□□□□ -0.42
HCFC1R1-208ENST00000575214 ARL17AQ8IVW1 177 aa12.4□□□□□ -0.42
HCFC1R1-208ENST00000575214 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
HCFC1R1-208ENST00000575214 S100A2P29034 98 aa12.38□□□□□ -0.43
HCFC1R1-208ENST00000575214 PRYO14603 147 aa12.37□□□□□ -0.43
HCFC1R1-208ENST00000575214 NPC2P61916 151 aa12.37□□□□□ -0.43
HCFC1R1-208ENST00000575214 ADAMTSL4-AS1Q5T5F5 129 aa12.37□□□□□ -0.43
HCFC1R1-208ENST00000575214 HIST3H2BBQ8N257 126 aa12.37□□□□□ -0.43
HCFC1R1-208ENST00000575214 S100A6P06703 90 aa12.36□□□□□ -0.43
HCFC1R1-208ENST00000575214 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
HCFC1R1-208ENST00000575214 ATOH7Q8N100 152 aa12.36□□□□□ -0.43
HCFC1R1-208ENST00000575214 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
HCFC1R1-208ENST00000575214 TRBV10-3A0A0K0K1G6 114 aa12.35□□□□□ -0.43
HCFC1R1-208ENST00000575214 AKR1D1P51857 326 aa12.34□□□□□ -0.43
HCFC1R1-208ENST00000575214 SPANXB1Q9NS25 103 aaPredicted RBP12.34□□□□□ -0.43
HCFC1R1-208ENST00000575214 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
HCFC1R1-208ENST00000575214 S100A12P80511 92 aa12.33□□□□□ -0.44
HCFC1R1-208ENST00000575214 SOSTDC1Q6X4U4 206 aa12.33□□□□□ -0.44
HCFC1R1-208ENST00000575214 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
HCFC1R1-208ENST00000575214 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
HCFC1R1-208ENST00000575214 TIMM17BO60830 172 aa12.32□□□□□ -0.44
HCFC1R1-208ENST00000575214 NDUFC2O95298 119 aa12.32□□□□□ -0.44
HCFC1R1-208ENST00000575214 DDTP30046 118 aa12.31□□□□□ -0.44
HCFC1R1-208ENST00000575214 ANKRD39Q53RE8 183 aa12.31□□□□□ -0.44
HCFC1R1-208ENST00000575214 LITAFQ99732 161 aa12.31□□□□□ -0.44
HCFC1R1-208ENST00000575214 HIGD2AQ9BW72 106 aa12.31□□□□□ -0.44
HCFC1R1-208ENST00000575214 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 A0A087X002 238 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 ETDCA0A1B0GVM5 59 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 CRYGAP11844 174 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 SPRR1AP35321 89 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 S100A7L2Q5SY68 101 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
HCFC1R1-208ENST00000575214 LINC00308Q8TCZ7 52 aa12.29□□□□□ -0.44
HCFC1R1-208ENST00000575214 SCGB1D4Q6XE38 83 aa12.28□□□□□ -0.44
HCFC1R1-208ENST00000575214 SNRPEP62304 92 aaKnown RBP12.26□□□□□ -0.45
HCFC1R1-208ENST00000575214 KRTAP4-16G5E9R7 235 aaPredicted RBP12.25□□□□□ -0.45
HCFC1R1-208ENST00000575214 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
HCFC1R1-208ENST00000575214 TYMSOSQ8TAI1 123 aa12.25□□□□□ -0.45
HCFC1R1-208ENST00000575214 SPANXCQ9NY87 97 aa12.25□□□□□ -0.45
HCFC1R1-208ENST00000575214 FAM229BQ4G0N7 80 aa12.24□□□□□ -0.45
HCFC1R1-208ENST00000575214 PCP2Q8IVA1 136 aa12.23□□□□□ -0.45
HCFC1R1-208ENST00000575214 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.45
HCFC1R1-208ENST00000575214 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms