RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 Q8N8P6 123 aa4.72□□□□□ -1.65
SMG1-216ENST00000569122 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 PFN2P35080 140 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 RAB14P61106 215 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 TIMM17AQ99595 171 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
SMG1-216ENST00000569122 H3BRM9 83 aa4.7□□□□□ -1.66
SMG1-216ENST00000569122 MOBPQ13875 183 aa4.7□□□□□ -1.66
SMG1-216ENST00000569122 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
SMG1-216ENST00000569122 SMCR5Q8TEV8 140 aa4.7□□□□□ -1.66
SMG1-216ENST00000569122 IGLV5-45A0A087WSX0 123 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 LINC01549A6NIU2 74 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 S100A12P80511 92 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 GAGE2AQ6NT46 116 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 SFTA2Q6UW10 78 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 ATP5L2Q7Z4Y8 100 aa4.69□□□□□ -1.66
SMG1-216ENST00000569122 NXT2Q9NPJ8 142 aaKnown RBP4.69□□□□□ -1.66
SMG1-216ENST00000569122 ETDCA0A1B0GVM5 59 aa4.68□□□□□ -1.66
SMG1-216ENST00000569122 PRYO14603 147 aa4.68□□□□□ -1.66
SMG1-216ENST00000569122 ADIRFQ15847 76 aa4.68□□□□□ -1.66
SMG1-216ENST00000569122 ERASQ7Z444 233 aa4.68□□□□□ -1.66
SMG1-216ENST00000569122 ERG28Q9UKR5 140 aa4.68□□□□□ -1.66
SMG1-216ENST00000569122 SPINK8P0C7L1 97 aa4.67□□□□□ -1.66
SMG1-216ENST00000569122 RPL23P62829 140 aaKnown RBP4.67□□□□□ -1.66
SMG1-216ENST00000569122 TOMM6Q96B49 74 aa4.67□□□□□ -1.66
SMG1-216ENST00000569122 LIMD2Q9BT23 127 aa4.67□□□□□ -1.66
SMG1-216ENST00000569122 SRP19P09132 144 aaKnown RBP4.66□□□□□ -1.66
SMG1-216ENST00000569122 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
SMG1-216ENST00000569122 NAT8Q9UHE5 227 aa4.66□□□□□ -1.66
SMG1-216ENST00000569122 TRAV9-1A0A075B6T8 112 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 SPRR1AP35321 89 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 ALKAL2Q6UX46 152 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 KCNQ1DNQ9H478 68 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 USH2AO75445 5202 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 SSPOA2VEC9 5147 aa4.65□□□□□ -1.67
SMG1-216ENST00000569122 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
SMG1-216ENST00000569122 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
SMG1-216ENST00000569122 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
SMG1-216ENST00000569122 C9orf153Q5TBE3 101 aa4.64□□□□□ -1.67
SMG1-216ENST00000569122 CST9LQ9H4G1 147 aa4.64□□□□□ -1.67
SMG1-216ENST00000569122 LINC00846Q9NV44 126 aa4.64□□□□□ -1.67
SMG1-216ENST00000569122 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
SMG1-216ENST00000569122 PMVKQ15126 192 aa4.63□□□□□ -1.67
SMG1-216ENST00000569122 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
SMG1-216ENST00000569122 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
SMG1-216ENST00000569122 IGLV5-39A0A0G2JS06 123 aa4.62□□□□□ -1.67
SMG1-216ENST00000569122 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
SMG1-216ENST00000569122 ATP6V1G1O75348 118 aa4.62□□□□□ -1.67
SMG1-216ENST00000569122 LINC00158P58513 81 aa4.62□□□□□ -1.67
SMG1-216ENST00000569122 Q8NDZ9 215 aa4.61□□□□□ -1.67
SMG1-216ENST00000569122 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
SMG1-216ENST00000569122 RPL37P61927 97 aaKnown RBP4.6□□□□□ -1.67
SMG1-216ENST00000569122 JOSD1Q15040 202 aaPredicted RBP4.6□□□□□ -1.67
SMG1-216ENST00000569122 TCTE3Q8IZS6 198 aa4.6□□□□□ -1.67
SMG1-216ENST00000569122 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
SMG1-216ENST00000569122 C5orf52A6NGY3 159 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 LINC00587B1AMM8 73 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 B5MCH6 92 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 PEA15Q15121 130 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 SLC25A34Q6PIV7 304 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 Q6Q795 121 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 BOD1L2Q8IYS8 172 aa4.59□□□□□ -1.67
SMG1-216ENST00000569122 TMA7Q9Y2S6 64 aaKnown RBP4.59□□□□□ -1.67
SMG1-216ENST00000569122 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
SMG1-216ENST00000569122 IGLC3P0DOY3 106 aa4.58□□□□□ -1.68
SMG1-216ENST00000569122 ADCYAP1P18509 176 aa4.58□□□□□ -1.68
SMG1-216ENST00000569122 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
SMG1-216ENST00000569122 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
SMG1-216ENST00000569122 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
SMG1-216ENST00000569122 TRBV10-3A0A0K0K1G6 114 aa4.56□□□□□ -1.68
SMG1-216ENST00000569122 NCR3O14931 201 aa4.56□□□□□ -1.68
SMG1-216ENST00000569122 Q6ZRX8 168 aa4.56□□□□□ -1.68
SMG1-216ENST00000569122 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
SMG1-216ENST00000569122 ZNF22P17026 224 aaPredicted RBP4.55□□□□□ -1.68
SMG1-216ENST00000569122 CD164Q04900 197 aa4.55□□□□□ -1.68
SMG1-216ENST00000569122 Q9BRP9 147 aa4.55□□□□□ -1.68
SMG1-216ENST00000569122 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 C20orf202A1L168 122 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 LINC01546A6NGU7 62 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 DDTP30046 118 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 NDUFA6P56556 154 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 ANAPC16Q96DE5 110 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 MAP1LC3CQ9BXW4 147 aa4.54□□□□□ -1.68
SMG1-216ENST00000569122 TRBV10-2A0A0K0K1G8 114 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 MT-ND4LP03901 98 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 HINT1P49773 126 aaPredicted RBP4.53□□□□□ -1.68
SMG1-216ENST00000569122 HERV-K104P63124 156 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 KIAA1644Q3SXP7 199 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 MEIG1Q5JSS6 88 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 Q5XG85 94 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 SMCO4Q9NRQ5 59 aa4.53□□□□□ -1.68
SMG1-216ENST00000569122 LAMTOR3Q9UHA4 124 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms