RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 FAM19A3Q7Z5A8 133 aa7.3□□□□□ -1.24
USB1-212ENST00000566082 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
USB1-212ENST00000566082 FLNAP21333 2647 aaKnown RBP7.29□□□□□ -1.24
USB1-212ENST00000566082 NDUFC1O43677 76 aa7.29□□□□□ -1.24
USB1-212ENST00000566082 Q8N9L7 120 aa7.29□□□□□ -1.24
USB1-212ENST00000566082 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
USB1-212ENST00000566082 PRR4Q16378 134 aa7.29□□□□□ -1.24
USB1-212ENST00000566082 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
USB1-212ENST00000566082 MUC7Q8TAX7 377 aa7.28□□□□□ -1.24
USB1-212ENST00000566082 FASNP49327 2511 aaKnown RBP7.28□□□□□ -1.24
USB1-212ENST00000566082 CRYBG3Q68DQ2 2970 aa7.28□□□□□ -1.24
USB1-212ENST00000566082 M0R378 163 aa7.28□□□□□ -1.24
USB1-212ENST00000566082 C10orf25Q5T742 122 aa7.28□□□□□ -1.24
USB1-212ENST00000566082 LINC01600Q96MT4 127 aa7.27□□□□□ -1.25
USB1-212ENST00000566082 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
USB1-212ENST00000566082 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
USB1-212ENST00000566082 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 FAM30AQ9NZY2 134 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 MP68P56378 58 aa7.26□□□□□ -1.25
USB1-212ENST00000566082 GCN1Q92616 2671 aaKnown RBP7.25□□□□□ -1.25
USB1-212ENST00000566082 KPRPQ5T749 579 aaPredicted RBP7.25□□□□□ -1.25
USB1-212ENST00000566082 SPATA3Q8NHX4 192 aa7.25□□□□□ -1.25
USB1-212ENST00000566082 TRAV10A0A0B4J240 114 aa7.24□□□□□ -1.25
USB1-212ENST00000566082 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
USB1-212ENST00000566082 SMR3AQ99954 134 aa7.24□□□□□ -1.25
USB1-212ENST00000566082 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
USB1-212ENST00000566082 Q6ZQT0 140 aa7.24□□□□□ -1.25
USB1-212ENST00000566082 ITPR1Q14643 2758 aa7.23□□□□□ -1.25
USB1-212ENST00000566082 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
USB1-212ENST00000566082 J3QKU1 62 aa7.23□□□□□ -1.25
USB1-212ENST00000566082 ITPR3Q14573 2671 aa7.23□□□□□ -1.25
USB1-212ENST00000566082 NBEAL2Q6ZNJ1 2754 aa7.23□□□□□ -1.25
USB1-212ENST00000566082 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
USB1-212ENST00000566082 CUBNO60494 3623 aa7.22□□□□□ -1.25
USB1-212ENST00000566082 A0A096LNI7 61 aa7.22□□□□□ -1.25
USB1-212ENST00000566082 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
USB1-212ENST00000566082 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
USB1-212ENST00000566082 TRBV7-6A0A0J9YX20 115 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 EGFEM1PQ0D2K5 195 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 WFDC13Q8IUB5 93 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 FLNCQ14315 2725 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 DEFB131BA0A096LNP1 70 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 FSHBP01225 129 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 WFDC10BQ8IUB3 73 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 TM2D3Q9BRN9 247 aa7.21□□□□□ -1.26
USB1-212ENST00000566082 INAFM1C9JVW0 142 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 PRYO14603 147 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 CDK2AP2O75956 126 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 CXCL6P80162 114 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 OXLD1Q5BKU9 147 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 USP24Q9UPU5 2620 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 GIG44P09565 113 aaPredicted RBP7.2□□□□□ -1.26
USB1-212ENST00000566082 LY6G6DO95868 133 aa7.2□□□□□ -1.26
USB1-212ENST00000566082 CELSR1Q9NYQ6 3014 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 ZFHX3Q15911 3703 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 Q6ZRU5 148 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 C11orf45Q8TAV5 145 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 C6orf48Q9UBA6 75 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
USB1-212ENST00000566082 X6R8D5 127 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 NDUFS5O43920 106 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 RETNQ9HD89 108 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 TEX15Q9BXT5 2789 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 CFAP46Q8IYW2 2715 aa7.18□□□□□ -1.26
USB1-212ENST00000566082 HECTD1Q9ULT8 2610 aa7.17□□□□□ -1.26
USB1-212ENST00000566082 ATRQ13535 2644 aa7.17□□□□□ -1.26
USB1-212ENST00000566082 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
USB1-212ENST00000566082 CSNK1G2-AS1Q8NCQ2 148 aa7.17□□□□□ -1.26
USB1-212ENST00000566082 LOC110117498A0A087WWA1 95 aa7.16□□□□□ -1.26
USB1-212ENST00000566082 H0Y9J4 135 aa7.16□□□□□ -1.26
USB1-212ENST00000566082 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
USB1-212ENST00000566082 NANOS2P60321 138 aaKnown RBP7.16□□□□□ -1.26
USB1-212ENST00000566082 DHRS4-AS1Q9P1J3 65 aa7.16□□□□□ -1.26
USB1-212ENST00000566082 KIAA0087Q14695 138 aa7.16□□□□□ -1.26
USB1-212ENST00000566082 A0A096LNT2 108 aa7.15□□□□□ -1.26
USB1-212ENST00000566082 C16orf95Q9H693 158 aa7.15□□□□□ -1.26
USB1-212ENST00000566082 Q6ZTC4 211 aa7.15□□□□□ -1.26
USB1-212ENST00000566082 C1orf195Q5TG92 126 aa7.15□□□□□ -1.27
USB1-212ENST00000566082 M0R2N4 97 aa7.14□□□□□ -1.27
USB1-212ENST00000566082 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
USB1-212ENST00000566082 PRO0628Q9UI54 55 aa7.14□□□□□ -1.27
USB1-212ENST00000566082 ZANQ9Y493 2812 aa7.14□□□□□ -1.27
USB1-212ENST00000566082 UBE2AP49459 152 aa7.14□□□□□ -1.27
USB1-212ENST00000566082 DEFB116Q30KQ4 102 aa7.14□□□□□ -1.27
USB1-212ENST00000566082 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
USB1-212ENST00000566082 A0A0J9YWU9 116 aa7.13□□□□□ -1.27
USB1-212ENST00000566082 BCE1O60756 84 aa7.13□□□□□ -1.27
USB1-212ENST00000566082 NDUFB1O75438 58 aa7.13□□□□□ -1.27
USB1-212ENST00000566082 V9GYY9 64 aa7.13□□□□□ -1.27
USB1-212ENST00000566082 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 C22orf24Q9Y442 160 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 PSPHP1O15172 72 aa7.12□□□□□ -1.27
USB1-212ENST00000566082 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms