RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DEFB1P60022 68 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 DEFB113Q30KQ7 82 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 LINC00483Q53H64 154 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 LYPD2Q6UXB3 125 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 LENEPQ9Y5L5 61 aa6.04□□□□□ -1.44
CDH1-205ENST00000562836 A0A1B0GW54 56 aa6.04□□□□□ -1.44
CDH1-205ENST00000562836 CYSRT1A8MQ03 144 aa6.04□□□□□ -1.44
CDH1-205ENST00000562836 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
CDH1-205ENST00000562836 FAM215AQ9Y5M1 114 aa6.04□□□□□ -1.44
CDH1-205ENST00000562836 RIF1Q5UIP0 2472 aaKnown RBP6.04□□□□□ -1.44
CDH1-205ENST00000562836 IGHV4-59P01825 116 aa6.03□□□□□ -1.44
CDH1-205ENST00000562836 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
CDH1-205ENST00000562836 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
CDH1-205ENST00000562836 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
CDH1-205ENST00000562836 OTOGLQ3ZCN5 2332 aa6.03□□□□□ -1.44
CDH1-205ENST00000562836 DSPP15924 2871 aaKnown RBP6.03□□□□□ -1.44
CDH1-205ENST00000562836 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
CDH1-205ENST00000562836 ZFHX2Q9C0A1 2572 aaPredicted RBP6.02□□□□□ -1.45
CDH1-205ENST00000562836 SPTBN2O15020 2390 aa6.02□□□□□ -1.45
CDH1-205ENST00000562836 F8W735 103 aaPredicted RBP6.01□□□□□ -1.45
CDH1-205ENST00000562836 WNK2Q9Y3S1 2297 aa6.01□□□□□ -1.45
CDH1-205ENST00000562836 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
CDH1-205ENST00000562836 IGHV4-28A0A0C4DH34 117 aa6□□□□□ -1.45
CDH1-205ENST00000562836 PROK1P58294 105 aa6□□□□□ -1.45
CDH1-205ENST00000562836 DMXL2Q8TDJ6 3036 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 ATMQ13315 3056 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 NPBQ8NG41 125 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 ZNF292O60281 2723 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 AKAP13Q12802 2813 aa5.99□□□□□ -1.45
CDH1-205ENST00000562836 COX7A1P24310 79 aa5.98□□□□□ -1.45
CDH1-205ENST00000562836 DSCR9P59020 149 aa5.98□□□□□ -1.45
CDH1-205ENST00000562836 PTPRZ1P23471 2315 aaPredicted RBP5.98□□□□□ -1.45
CDH1-205ENST00000562836 IGLV1-40P01703 118 aa5.98□□□□□ -1.45
CDH1-205ENST00000562836 Q8N9W7 124 aa5.98□□□□□ -1.45
CDH1-205ENST00000562836 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 RPL37AP8A6NKH3 93 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 ZNF861PO60384 105 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 CASC10Q5T4H9 136 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 KPRPQ5T749 579 aaPredicted RBP5.97□□□□□ -1.45
CDH1-205ENST00000562836 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 DEFB124Q8NES8 71 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 PRR34Q9NV39 138 aa5.97□□□□□ -1.45
CDH1-205ENST00000562836 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
CDH1-205ENST00000562836 DEFB109BQ30KR1 87 aa5.96□□□□□ -1.46
CDH1-205ENST00000562836 CEP250Q9BV73 2442 aa5.96□□□□□ -1.46
CDH1-205ENST00000562836 MAP1BP46821 2468 aaKnown RBP5.96□□□□□ -1.46
CDH1-205ENST00000562836 MUC6Q6W4X9 2439 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 GVINP1Q7Z2Y8 2422 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 A8MUU9 505 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 K7EQZ3 153 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 SMG1Q96Q15 3661 aaKnown RBP5.95□□□□□ -1.46
CDH1-205ENST00000562836 BSNQ9UPA5 3926 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 IGHV4-30-2A0A087WSY4 118 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 H3BQ85 93 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 FAM229AH3BQW9 127 aa5.95□□□□□ -1.46
CDH1-205ENST00000562836 ZFP36P26651 326 aaKnown RBP5.94□□□□□ -1.46
CDH1-205ENST00000562836 ROS1P08922 2347 aa5.94□□□□□ -1.46
CDH1-205ENST00000562836 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
CDH1-205ENST00000562836 A0A0J9YWU9 116 aa5.93□□□□□ -1.46
CDH1-205ENST00000562836 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
CDH1-205ENST00000562836 KLK9Q2XQG4 91 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 WFDC13Q8IUB5 93 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDH1-205ENST00000562836 PKDREJQ9NTG1 2253 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 ODF3BA8MYP8 253 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 DSCR10P59022 87 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 EGFEM1PQ0D2K5 195 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 RELNP78509 3460 aa5.92□□□□□ -1.46
CDH1-205ENST00000562836 MINOS1-NBL1R4GNA1 71 aa5.91□□□□□ -1.46
CDH1-205ENST00000562836 RP1L1Q8IWN7 2480 aaPredicted RBP5.91□□□□□ -1.46
CDH1-205ENST00000562836 PIEZO2Q9H5I5 2752 aa5.91□□□□□ -1.46
CDH1-205ENST00000562836 IGKV3OR2-268A0A0C4DH90 116 aa5.91□□□□□ -1.46
CDH1-205ENST00000562836 IGHV3-11P01762 117 aa5.91□□□□□ -1.46
CDH1-205ENST00000562836 IGLV5-52A0A0A0MRZ9 124 aa5.9□□□□□ -1.46
CDH1-205ENST00000562836 H3BPC8 53 aa5.9□□□□□ -1.47
CDH1-205ENST00000562836 IGHV4-30-4P0DP06 118 aa5.9□□□□□ -1.47
CDH1-205ENST00000562836 K7ERS5 55 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 LYNX1G3V0Z9 82 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 LYNX1P0DP58 116 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 HRES1P13985 223 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 KALRNO60229 2985 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 Q6ZSN1 163 aa5.89□□□□□ -1.47
CDH1-205ENST00000562836 CEP295Q9C0D2 2601 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 ADGRG4Q8IZF6 3080 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 ANKRD11Q6UB99 2663 aaPredicted RBP5.88□□□□□ -1.47
CDH1-205ENST00000562836 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 MSMBP08118 114 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 SPTBN1Q01082 2364 aaKnown RBP5.88□□□□□ -1.47
CDH1-205ENST00000562836 ZZEF1O43149 2961 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 MINOS1Q5TGZ0 78 aa5.88□□□□□ -1.47
CDH1-205ENST00000562836 IGHV4-61A0A0C4DH41 118 aa5.87□□□□□ -1.47
CDH1-205ENST00000562836 PLA2G2AP14555 144 aa5.87□□□□□ -1.47
CDH1-205ENST00000562836 TPRP12270 2363 aaKnown RBP5.87□□□□□ -1.47
CDH1-205ENST00000562836 APC2O95996 2303 aa5.87□□□□□ -1.47
CDH1-205ENST00000562836 IGKV3-7A0A075B6H7 116 aa5.87□□□□□ -1.47
CDH1-205ENST00000562836 ACACAQ13085 2346 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms