RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 LYRM9A8MSI8 78 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 TMEM238C9JI98 176 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 J3QQQ9 107 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 TAX1BP3O14907 124 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 UBE2L6O14933 153 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 LEPROTO15243 131 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 KRTAP10-4P60372 401 aaPredicted RBP2.12□□□□□ -2.07
SPG11-225ENST00000561391 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 SH2D6Q7Z4S9 175 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 SLC25A29Q8N8R3 303 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 CSNK1G2-AS1Q8NCQ2 148 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 OR5A1Q8NGJ0 315 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 AMELXQ99217 191 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 NOP10Q9NPE3 64 aaKnown RBP2.12□□□□□ -2.07
SPG11-225ENST00000561391 SPANXB1Q9NS25 103 aaPredicted RBP2.12□□□□□ -2.07
SPG11-225ENST00000561391 MRPL16Q9NX20 251 aaKnown RBP2.12□□□□□ -2.07
SPG11-225ENST00000561391 DHRS4-AS1Q9P1J3 65 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 TP73-AS1Q9UF72 201 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TRBV20-1A0A075B6N2 111 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 IGKV2D-26A0A0A0MRZ7 120 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.11□□□□□ -2.07
SPG11-225ENST00000561391 IGHV3-73A0A0B4J1V6 119 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 IGHV1-58A0A0C4DH39 117 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 A0A0J9YXY3 114 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 A0A1B0GWB2 263 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 A0A1W2PPM0 123 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 F8W1H4 67 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 K7EP13 123 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 K7ERU9 68 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TIMM17BO60830 172 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 GIG44P09565 113 aaPredicted RBP2.11□□□□□ -2.07
SPG11-225ENST00000561391 DNAH10OSP0CZ25 163 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 IFITM1P13164 125 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 MIFP14174 115 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 UBE2D3P61077 147 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 UBE2D2P62837 147 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 RPL39P62891 51 aaKnown RBP2.11□□□□□ -2.07
SPG11-225ENST00000561391 LCE3AQ5TA76 89 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 FAM19A3Q7Z5A8 133 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TYMSOSQ8TAI1 123 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TMEM243Q9BU79 118 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 PPDPFQ9H3Y8 114 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 Q9HAA7 133 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 PRO0255Q9UI72 69 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 UBE2D4Q9Y2X8 147 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 LINC00588Q9Y4M8 146 aa2.11□□□□□ -2.07
SPG11-225ENST00000561391 TRAV26-1A0A087WT03 109 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 A0A087WTM6 91 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 TRBV6-8A0A0A6YYG3 113 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 A0A0J9YY99 117 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 A0A0U1RRA0 63 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 H3BUT2 72 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 J3QR89 54 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 K7EP34 96 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 COX6CP09669 75 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 SPART-AS1P0CW21 52 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
SPG11-225ENST00000561391 UBE2D1P51668 147 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 EMP1P54849 157 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 CCL18P55774 89 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 Q6ZTI0 123 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 LINC01561Q8N1V8 128 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 LINC00612Q8N6U2 182 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 VSIG2Q96IQ7 327 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 CDC42SE2Q9NRR3 84 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 NHP2Q9NX24 153 aaKnown RBP2.1□□□□□ -2.07
SPG11-225ENST00000561391 PRO1854Q9UHT4 67 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 CBY1Q9Y3M2 126 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 SPCS1Q9Y6A9 102 aa2.1□□□□□ -2.07
SPG11-225ENST00000561391 A0A0B4J2C4 111 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 A0A0J9YXV3 536 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 PLAC8L1A1L4L8 177 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 NDUFA1O15239 70 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 IGHV3-30-3P0DP02 117 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 FXYD2P54710 66 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 TTC32Q5I0X7 151 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 Q6ZRN7 208 aaPredicted RBP2.09□□□□□ -2.07
SPG11-225ENST00000561391 ATP6V0E2Q8NHE4 81 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 SPANXDQ9BXN6 97 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 SPANXCQ9NY87 97 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 ERG28Q9UKR5 140 aa2.09□□□□□ -2.07
SPG11-225ENST00000561391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
SPG11-225ENST00000561391 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
SPG11-225ENST00000561391 H3BNG1 76 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 M0QXV9 152 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 IGHV3-30P01768 117 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 PRM2P04554 102 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 ATP5G1P05496 136 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 SCGB1C2P0DMR2 95 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 IGHV3-30-5P0DP03 117 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 DEFB130BP0DP73 79 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 DEFB130AP0DP74 79 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 DAD1P61803 113 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 SS18Q15532 418 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 MRPL23Q16540 153 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms