RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 J3QQQ9 107 aa9.53□□□□□ -0.88
RABGGTA-219ENST00000560871 HIST3H2BBQ8N257 126 aa9.53□□□□□ -0.88
RABGGTA-219ENST00000560871 KRTDAPP60985 99 aa9.52□□□□□ -0.89
RABGGTA-219ENST00000560871 MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-219ENST00000560871 TNXBP22105 4242 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 SMIM13P0DJ93 91 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 LINC00158P58513 81 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 UBE2BP63146 152 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 C1orf137Q5JT78 98 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 Q8NDZ9 215 aa9.51□□□□□ -0.89
RABGGTA-219ENST00000560871 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
RABGGTA-219ENST00000560871 VPREB1P12018 145 aa9.5□□□□□ -0.89
RABGGTA-219ENST00000560871 NMUP48645 174 aa9.5□□□□□ -0.89
RABGGTA-219ENST00000560871 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
RABGGTA-219ENST00000560871 LGALS3P17931 250 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-219ENST00000560871 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
RABGGTA-219ENST00000560871 SPINK6Q6UWN8 80 aa9.49□□□□□ -0.89
RABGGTA-219ENST00000560871 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
RABGGTA-219ENST00000560871 MT1HL1P0DM35 61 aa9.48□□□□□ -0.89
RABGGTA-219ENST00000560871 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
RABGGTA-219ENST00000560871 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
RABGGTA-219ENST00000560871 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
RABGGTA-219ENST00000560871 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
RABGGTA-219ENST00000560871 NKAPP1Q8N9T2 125 aa9.47□□□□□ -0.89
RABGGTA-219ENST00000560871 C20orf202A1L168 122 aa9.46□□□□□ -0.9
RABGGTA-219ENST00000560871 S100A6P06703 90 aa9.46□□□□□ -0.9
RABGGTA-219ENST00000560871 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
RABGGTA-219ENST00000560871 S100A2P29034 98 aa9.45□□□□□ -0.9
RABGGTA-219ENST00000560871 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-219ENST00000560871 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
RABGGTA-219ENST00000560871 GAGE10A6NGK3 116 aa9.44□□□□□ -0.9
RABGGTA-219ENST00000560871 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
RABGGTA-219ENST00000560871 SNRPEP62304 92 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-219ENST00000560871 LOC107984156A0A0G2JMH3 177 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 C5orf52A6NGY3 159 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 ARL17AQ8IVW1 177 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 ATOH7Q8N100 152 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 DAND5Q8N907 189 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
RABGGTA-219ENST00000560871 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
RABGGTA-219ENST00000560871 AKR1D1P51857 326 aa9.41□□□□□ -0.9
RABGGTA-219ENST00000560871 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
RABGGTA-219ENST00000560871 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 BCE1O60756 84 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 IGKV2D-28P01615 120 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 BOD1L2Q8IYS8 172 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 LITAFQ99732 161 aa9.4□□□□□ -0.9
RABGGTA-219ENST00000560871 H0Y9J4 135 aa9.39□□□□□ -0.91
RABGGTA-219ENST00000560871 REG3GQ6UW15 175 aa9.39□□□□□ -0.91
RABGGTA-219ENST00000560871 ZNF815PA8K554 130 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 M0R378 163 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 ZNF861PO60384 105 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
RABGGTA-219ENST00000560871 NCR3O14931 201 aa9.37□□□□□ -0.91
RABGGTA-219ENST00000560871 KRTAP13-1Q8IUC0 172 aa9.37□□□□□ -0.91
RABGGTA-219ENST00000560871 EIF4EBP3O60516 100 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-219ENST00000560871 TIMM17BO60830 172 aa9.36□□□□□ -0.91
RABGGTA-219ENST00000560871 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
RABGGTA-219ENST00000560871 TMEM238C9JI98 176 aa9.35□□□□□ -0.91
RABGGTA-219ENST00000560871 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
RABGGTA-219ENST00000560871 NDUFC2O95298 119 aa9.34□□□□□ -0.91
RABGGTA-219ENST00000560871 KRTAP1-4P0C5Y4 121 aa9.34□□□□□ -0.91
RABGGTA-219ENST00000560871 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
RABGGTA-219ENST00000560871 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-219ENST00000560871 NPC2P61916 151 aa9.33□□□□□ -0.92
RABGGTA-219ENST00000560871 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
RABGGTA-219ENST00000560871 PRYO14603 147 aa9.32□□□□□ -0.92
RABGGTA-219ENST00000560871 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
RABGGTA-219ENST00000560871 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-219ENST00000560871 TRBV10-3A0A0K0K1G6 114 aa9.31□□□□□ -0.92
RABGGTA-219ENST00000560871 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
RABGGTA-219ENST00000560871 SPRR1AP35321 89 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 UBE2AP49459 152 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 PRLHP81277 87 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
RABGGTA-219ENST00000560871 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
RABGGTA-219ENST00000560871 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
RABGGTA-219ENST00000560871 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-219ENST00000560871 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
RABGGTA-219ENST00000560871 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
RABGGTA-219ENST00000560871 IGLV6-57P01721 117 aa9.27□□□□□ -0.93
RABGGTA-219ENST00000560871 DDTP30046 118 aa9.27□□□□□ -0.93
RABGGTA-219ENST00000560871 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
RABGGTA-219ENST00000560871 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
RABGGTA-219ENST00000560871 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
RABGGTA-219ENST00000560871 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
RABGGTA-219ENST00000560871 Q6ZVH6 145 aa9.23□□□□□ -0.93
RABGGTA-219ENST00000560871 IFITM1P13164 125 aa9.22□□□□□ -0.93
RABGGTA-219ENST00000560871 S100A12P80511 92 aa9.22□□□□□ -0.93
RABGGTA-219ENST00000560871 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-219ENST00000560871 UBR4Q5T4S7 5183 aa9.21□□□□□ -0.93
RABGGTA-219ENST00000560871 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms