RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 LINC00469Q8N7U9 141 aa8.71□□□□□ -1.01
TNFAIP2-207ENST00000560562 ORAOV1Q8WV07 137 aa8.71□□□□□ -1.01
TNFAIP2-207ENST00000560562 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.01
TNFAIP2-207ENST00000560562 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.01
TNFAIP2-207ENST00000560562 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
TNFAIP2-207ENST00000560562 A0A1W2PNN7 141 aa8.71□□□□□ -1.02
TNFAIP2-207ENST00000560562 APOMO95445 188 aa8.71□□□□□ -1.02
TNFAIP2-207ENST00000560562 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
TNFAIP2-207ENST00000560562 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
TNFAIP2-207ENST00000560562 H3BRM9 83 aa8.7□□□□□ -1.02
TNFAIP2-207ENST00000560562 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
TNFAIP2-207ENST00000560562 CEND1Q8N111 149 aa8.69□□□□□ -1.02
TNFAIP2-207ENST00000560562 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
TNFAIP2-207ENST00000560562 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
TNFAIP2-207ENST00000560562 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
TNFAIP2-207ENST00000560562 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
TNFAIP2-207ENST00000560562 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
TNFAIP2-207ENST00000560562 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
TNFAIP2-207ENST00000560562 A0A087WZ39 114 aa8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 A6NDN8 102 aa8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 FXYD2P54710 66 aa8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 UNQ6190/PRO20217Q6UXQ8 127 aa8.67□□□□□ -1.02
TNFAIP2-207ENST00000560562 RNF151Q2KHN1 245 aa8.66□□□□□ -1.02
TNFAIP2-207ENST00000560562 C9orf116Q5BN46 136 aaPredicted RBP8.66□□□□□ -1.02
TNFAIP2-207ENST00000560562 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
TNFAIP2-207ENST00000560562 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
TNFAIP2-207ENST00000560562 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
TNFAIP2-207ENST00000560562 SCGB1D4Q6XE38 83 aa8.65□□□□□ -1.02
TNFAIP2-207ENST00000560562 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
TNFAIP2-207ENST00000560562 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
TNFAIP2-207ENST00000560562 Q6ZRP5 223 aa8.64□□□□□ -1.03
TNFAIP2-207ENST00000560562 HIST1H4GQ99525 98 aa8.64□□□□□ -1.03
TNFAIP2-207ENST00000560562 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 NDUFA1O15239 70 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 C2orf82Q6UX34 121 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 Q6ZVH6 145 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
TNFAIP2-207ENST00000560562 F8WDY8 70 aa8.62□□□□□ -1.03
TNFAIP2-207ENST00000560562 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
TNFAIP2-207ENST00000560562 LRP2P98164 4655 aa8.62□□□□□ -1.03
TNFAIP2-207ENST00000560562 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
TNFAIP2-207ENST00000560562 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
TNFAIP2-207ENST00000560562 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
TNFAIP2-207ENST00000560562 LITAFQ99732 161 aa8.61□□□□□ -1.03
TNFAIP2-207ENST00000560562 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
TNFAIP2-207ENST00000560562 TIMM17BO60830 172 aa8.6□□□□□ -1.03
TNFAIP2-207ENST00000560562 PRSS2P07478 247 aa8.6□□□□□ -1.03
TNFAIP2-207ENST00000560562 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
TNFAIP2-207ENST00000560562 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
TNFAIP2-207ENST00000560562 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
TNFAIP2-207ENST00000560562 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
TNFAIP2-207ENST00000560562 Q8IZM0 81 aa8.59□□□□□ -1.03
TNFAIP2-207ENST00000560562 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
TNFAIP2-207ENST00000560562 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
TNFAIP2-207ENST00000560562 C6orf226Q5I0X4 101 aa8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
TNFAIP2-207ENST00000560562 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
TNFAIP2-207ENST00000560562 A6NJY4 79 aa8.57□□□□□ -1.04
TNFAIP2-207ENST00000560562 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
TNFAIP2-207ENST00000560562 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
TNFAIP2-207ENST00000560562 TRBV30A0A0K0K1B3 111 aa8.56□□□□□ -1.04
TNFAIP2-207ENST00000560562 K7ERJ3 54 aa8.56□□□□□ -1.04
TNFAIP2-207ENST00000560562 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
TNFAIP2-207ENST00000560562 CKS1BP61024 79 aa8.55□□□□□ -1.04
TNFAIP2-207ENST00000560562 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
TNFAIP2-207ENST00000560562 CXCL5P42830 114 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 HERV-K104P63124 156 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 SFTA2Q6UW10 78 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
TNFAIP2-207ENST00000560562 H3BUT2 72 aa8.53□□□□□ -1.04
TNFAIP2-207ENST00000560562 M0QXV9 152 aa8.53□□□□□ -1.04
TNFAIP2-207ENST00000560562 UBE2V1Q13404 147 aa8.53□□□□□ -1.04
TNFAIP2-207ENST00000560562 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 CFC1P0CG37 223 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 IFITM1P13164 125 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 VAMP3Q15836 100 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
TNFAIP2-207ENST00000560562 A4D1N5 150 aa8.51□□□□□ -1.05
TNFAIP2-207ENST00000560562 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
TNFAIP2-207ENST00000560562 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
TNFAIP2-207ENST00000560562 A0A0B4J2C4 111 aa8.5□□□□□ -1.05
TNFAIP2-207ENST00000560562 NAA38Q9BRA0 125 aaKnown RBP8.5□□□□□ -1.05
TNFAIP2-207ENST00000560562 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 529 ms