RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SLC25A2Q9BXI2 301 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 AGPAT4-IT1Q9H0P7 198 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 ST20Q9HBF5 79 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 LENEPQ9Y5L5 61 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 PEX7O00628 323 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 OR7C2O60412 319 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 LTAP01374 205 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 APCSP02743 223 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 IGKV4-1P06312 121 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 OR5AL1P0C617 328 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 TLX1NBP0CAT3 122 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 FGF6P10767 208 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 PMCHP20382 165 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 TAS2R45P59539 299 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 UBE2G1P62253 170 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 RPL18AQ02543 176 aaKnown RBP1.53□□□□□ -2.16
LRRC28-218ENST00000560236 PDE6HQ13956 83 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 MPV17L2Q567V2 206 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 BVES-AS1Q5T3Y7 98 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 LINC01545Q5VT33 79 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 C2orf91Q6ZV80 131 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 LINC00305Q7Z4B0 112 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 BAGE3Q86Y29 109 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 BAGE2Q86Y30 109 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 LINC00304Q8N9R0 145 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 CHCHD1Q96BP2 118 aaKnown RBP1.53□□□□□ -2.16
LRRC28-218ENST00000560236 FXYD5Q96DB9 178 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 NDFIP1Q9BT67 221 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 RNASE7Q9H1E1 156 aaKnown RBP1.53□□□□□ -2.16
LRRC28-218ENST00000560236 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
LRRC28-218ENST00000560236 GVQW2A0A096LPI5 108 aaPredicted RBP1.52□□□□□ -2.17
LRRC28-218ENST00000560236 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 IGHV1-24A0A0C4DH33 117 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 LOC107984640A0A0U1RRK4 108 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 A0A1B0GW15 77 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 RBAKDNA6NC62 111 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 SYS1-DBNDD2H3BUS1 97 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 GNRH2O43555 120 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 NBEAP1P0C6P0 100 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 COX8AP10176 69 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 CXCL5P42830 114 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 KRTDAPP60985 99 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 ERCC8Q13216 396 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 PRR9Q5T870 116 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 Q5W150 140 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 MRPL54Q6P161 138 aaKnown RBP1.52□□□□□ -2.17
LRRC28-218ENST00000560236 SPAG11AQ6PDA7 123 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 Q6ZN92 141 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 C15orf56Q8N910 161 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 C5orf17Q8NAS9 161 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 OR1L4Q8NGR5 311 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 PMCHL2Q9BQD1 86 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 TMEM14CQ9P0S9 112 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 EPDR1Q9UM22 224 aa1.52□□□□□ -2.17
LRRC28-218ENST00000560236 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 TRAV21A0A0B4J279 112 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 A0A1W2PNN7 141 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 HIGD1CA8MV81 97 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 A8MWL6 223 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 M0R3E3 92 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 COX7A2P2O60397 106 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 HSBP1O75506 76 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 TCRAP04437 139 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 PYYP10082 97 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 HINT1P49773 126 aaPredicted RBP1.51□□□□□ -2.17
LRRC28-218ENST00000560236 UBE2D3P61077 147 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 UBE2D2P62837 147 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 SEC11AP67812 179 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 UBE2L3P68036 154 aaKnown RBP1.51□□□□□ -2.17
LRRC28-218ENST00000560236 HBBP68871 147 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 COTL1Q14019 142 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 OCIAD2Q56VL3 154 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 C9orf116Q5BN46 136 aaPredicted RBP1.51□□□□□ -2.17
LRRC28-218ENST00000560236 C10orf113Q5VZT2 155 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 SLC25A34Q6PIV7 304 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 COX6B2Q6YFQ2 88 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 Q86TA4 180 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 BOD1L2Q8IYS8 172 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 FAM19A2Q8N3H0 131 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 DAND5Q8N907 189 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 BORCS7Q96B45 105 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 FMC1Q96HJ9 113 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 CARD19Q96LW7 228 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 CST9LQ9H4G1 147 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 OTORQ9NRC9 128 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 HIGD1BQ9P298 99 aa1.51□□□□□ -2.17
LRRC28-218ENST00000560236 TRBV19A0A075B6N1 114 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 TRBV25-1A0A075B6N4 114 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 MUC21A0A140T8X8 626 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 A0A1B0GUT8 65 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 H3BRM9 83 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 K7EP34 96 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 LEPROTL1O95214 131 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms