RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 HERV-K104P63124 156 aa9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
RABGGTA-206ENST00000558649 SPINK6Q6UWN8 80 aa9.74□□□□□ -0.85
RABGGTA-206ENST00000558649 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
RABGGTA-206ENST00000558649 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
RABGGTA-206ENST00000558649 OXTP01178 125 aa9.73□□□□□ -0.85
RABGGTA-206ENST00000558649 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
RABGGTA-206ENST00000558649 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
RABGGTA-206ENST00000558649 LINC00167Q96N53 147 aa9.72□□□□□ -0.85
RABGGTA-206ENST00000558649 IGLV5-37A0A075B6J1 123 aa9.71□□□□□ -0.86
RABGGTA-206ENST00000558649 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
RABGGTA-206ENST00000558649 MIR7-3HGQ8N6C7 128 aa9.71□□□□□ -0.86
RABGGTA-206ENST00000558649 E9PLD3 99 aa9.7□□□□□ -0.86
RABGGTA-206ENST00000558649 VPREB1P12018 145 aa9.7□□□□□ -0.86
RABGGTA-206ENST00000558649 NMUP48645 174 aa9.7□□□□□ -0.86
RABGGTA-206ENST00000558649 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-206ENST00000558649 Q8NDZ9 215 aa9.7□□□□□ -0.86
RABGGTA-206ENST00000558649 IGKV2-28A0A075B6P5 120 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 C20orf202A1L168 122 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 IGKV2D-28P01615 120 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 S100A6P06703 90 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 S100A2P29034 98 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 HIST3H2BBQ8N257 126 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 DAND5Q8N907 189 aa9.69□□□□□ -0.86
RABGGTA-206ENST00000558649 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
RABGGTA-206ENST00000558649 BOD1L2Q8IYS8 172 aa9.67□□□□□ -0.86
RABGGTA-206ENST00000558649 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
RABGGTA-206ENST00000558649 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-206ENST00000558649 NCR3O14931 201 aa9.65□□□□□ -0.86
RABGGTA-206ENST00000558649 DIRC1Q969H9 104 aa9.65□□□□□ -0.86
RABGGTA-206ENST00000558649 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
RABGGTA-206ENST00000558649 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-206ENST00000558649 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
RABGGTA-206ENST00000558649 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
RABGGTA-206ENST00000558649 BCE1O60756 84 aa9.64□□□□□ -0.87
RABGGTA-206ENST00000558649 H0Y9J4 135 aa9.63□□□□□ -0.87
RABGGTA-206ENST00000558649 NPC2P61916 151 aa9.63□□□□□ -0.87
RABGGTA-206ENST00000558649 SNRPEP62304 92 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-206ENST00000558649 TTTY13Q9BZ97 58 aa9.63□□□□□ -0.87
RABGGTA-206ENST00000558649 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 MT1HL1P0DM35 61 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
RABGGTA-206ENST00000558649 M0R378 163 aa9.61□□□□□ -0.87
RABGGTA-206ENST00000558649 ZNF861PO60384 105 aa9.61□□□□□ -0.87
RABGGTA-206ENST00000558649 FAT3Q8TDW7 4589 aa9.61□□□□□ -0.87
RABGGTA-206ENST00000558649 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-206ENST00000558649 UBE2AP49459 152 aa9.6□□□□□ -0.87
RABGGTA-206ENST00000558649 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
RABGGTA-206ENST00000558649 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
RABGGTA-206ENST00000558649 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
RABGGTA-206ENST00000558649 AKR1D1P51857 326 aa9.58□□□□□ -0.88
RABGGTA-206ENST00000558649 FAM19A1Q7Z5A9 133 aa9.58□□□□□ -0.88
RABGGTA-206ENST00000558649 PRLHP81277 87 aa9.57□□□□□ -0.88
RABGGTA-206ENST00000558649 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
RABGGTA-206ENST00000558649 SCGB1D4Q6XE38 83 aa9.56□□□□□ -0.88
RABGGTA-206ENST00000558649 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 TRBV10-3A0A0K0K1G6 114 aa9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 LITAFQ99732 161 aa9.55□□□□□ -0.88
RABGGTA-206ENST00000558649 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
RABGGTA-206ENST00000558649 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-206ENST00000558649 PRYO14603 147 aa9.53□□□□□ -0.88
RABGGTA-206ENST00000558649 TIMM17BO60830 172 aa9.53□□□□□ -0.88
RABGGTA-206ENST00000558649 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
RABGGTA-206ENST00000558649 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
RABGGTA-206ENST00000558649 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
RABGGTA-206ENST00000558649 HSBP1L1C9JCN9 74 aa9.52□□□□□ -0.89
RABGGTA-206ENST00000558649 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
RABGGTA-206ENST00000558649 DDTP30046 118 aa9.52□□□□□ -0.89
RABGGTA-206ENST00000558649 HERC1Q15751 4861 aa9.52□□□□□ -0.89
RABGGTA-206ENST00000558649 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.89
RABGGTA-206ENST00000558649 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
RABGGTA-206ENST00000558649 NDUFC2O95298 119 aa9.51□□□□□ -0.89
RABGGTA-206ENST00000558649 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
RABGGTA-206ENST00000558649 S100A7L2Q5SY68 101 aa9.51□□□□□ -0.89
RABGGTA-206ENST00000558649 S100A12P80511 92 aa9.5□□□□□ -0.89
RABGGTA-206ENST00000558649 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
RABGGTA-206ENST00000558649 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
RABGGTA-206ENST00000558649 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
RABGGTA-206ENST00000558649 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
RABGGTA-206ENST00000558649 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
RABGGTA-206ENST00000558649 OR13C6PQ8NH95 151 aa9.46□□□□□ -0.9
RABGGTA-206ENST00000558649 ANAPC11Q9NYG5 84 aa9.46□□□□□ -0.9
RABGGTA-206ENST00000558649 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-206ENST00000558649 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
RABGGTA-206ENST00000558649 SPRR1AP35321 89 aa9.45□□□□□ -0.9
RABGGTA-206ENST00000558649 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
RABGGTA-206ENST00000558649 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
RABGGTA-206ENST00000558649 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-206ENST00000558649 TNXBP22105 4242 aa9.43□□□□□ -0.9
RABGGTA-206ENST00000558649 A0A087X002 238 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms