RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.3
TPM1-212ENST00000558347 TRAV8-4A0A0B4J246 113 aa6.95□□□□□ -1.3
TPM1-212ENST00000558347 CKS1BP61024 79 aa6.95□□□□□ -1.3
TPM1-212ENST00000558347 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
TPM1-212ENST00000558347 TRAV13-2A0A0B4J235 113 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 Q6Q795 121 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 DAND5Q8N907 189 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
TPM1-212ENST00000558347 TRACP01848 142 aa6.93□□□□□ -1.3
TPM1-212ENST00000558347 LELP1Q5T871 98 aa6.93□□□□□ -1.3
TPM1-212ENST00000558347 TEX49A0A1B0GTD5 131 aa6.92□□□□□ -1.3
TPM1-212ENST00000558347 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
TPM1-212ENST00000558347 LINC01561Q8N1V8 128 aa6.92□□□□□ -1.3
TPM1-212ENST00000558347 A0A087WZ39 114 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 SNCGO76070 127 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 GAGE6Q13070 117 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 WFDC10BQ8IUB3 73 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 IGHV3OR16-9A0A0B4J2B5 98 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 ACYP1P07311 99 aa6.91□□□□□ -1.3
TPM1-212ENST00000558347 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
TPM1-212ENST00000558347 CRPP02741 224 aa6.9□□□□□ -1.31
TPM1-212ENST00000558347 KRTAP10-2P60368 255 aa6.9□□□□□ -1.31
TPM1-212ENST00000558347 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
TPM1-212ENST00000558347 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
TPM1-212ENST00000558347 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
TPM1-212ENST00000558347 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
TPM1-212ENST00000558347 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
TPM1-212ENST00000558347 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
TPM1-212ENST00000558347 DNAH10OSP0CZ25 163 aa6.87□□□□□ -1.31
TPM1-212ENST00000558347 MIR7-3HGQ8N6C7 128 aa6.87□□□□□ -1.31
TPM1-212ENST00000558347 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
TPM1-212ENST00000558347 H0YGX0 51 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 SS18Q15532 418 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
TPM1-212ENST00000558347 LINC00158P58513 81 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 Q8IZM0 81 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
TPM1-212ENST00000558347 DNAH8Q96JB1 4490 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 BAALC-AS2P0C853 105 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 INAFM2P0DMQ5 153 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 ANAPC13Q9BS18 74 aa6.85□□□□□ -1.31
TPM1-212ENST00000558347 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
TPM1-212ENST00000558347 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
TPM1-212ENST00000558347 A0A087WTM6 91 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 TRBV7-7A0A0K0K1E9 115 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 CXCL5P42830 114 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
TPM1-212ENST00000558347 C5orf38Q86SI9 138 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
TPM1-212ENST00000558347 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
TPM1-212ENST00000558347 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 Q8N3U1 123 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 SMIM11BQ8TCY0 68 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
TPM1-212ENST00000558347 MALP21145 153 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 COX17Q14061 63 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 FAT1Q14517 4588 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 DNAL4O96015 105 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 REG3AQ06141 175 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
TPM1-212ENST00000558347 A0A1B0GX51 115 aa6.8□□□□□ -1.32
TPM1-212ENST00000558347 NDUFC2O95298 119 aa6.8□□□□□ -1.32
TPM1-212ENST00000558347 Q9HAA7 133 aa6.8□□□□□ -1.32
TPM1-212ENST00000558347 KLK12Q9UKR0 248 aa6.8□□□□□ -1.32
TPM1-212ENST00000558347 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
TPM1-212ENST00000558347 XCL1P47992 114 aa6.79□□□□□ -1.32
TPM1-212ENST00000558347 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
TPM1-212ENST00000558347 PSCAO43653 123 aa6.78□□□□□ -1.32
TPM1-212ENST00000558347 PFN2P35080 140 aa6.78□□□□□ -1.32
TPM1-212ENST00000558347 Q8N1X5 172 aa6.78□□□□□ -1.32
TPM1-212ENST00000558347 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
TPM1-212ENST00000558347 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
TPM1-212ENST00000558347 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
TPM1-212ENST00000558347 CFAP161Q6P656 301 aa6.77□□□□□ -1.33
TPM1-212ENST00000558347 CLPSL2Q6UWE3 100 aa6.77□□□□□ -1.33
TPM1-212ENST00000558347 LINC00167Q96N53 147 aa6.77□□□□□ -1.33
TPM1-212ENST00000558347 A0A087WYN8 130 aa6.76□□□□□ -1.33
TPM1-212ENST00000558347 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
TPM1-212ENST00000558347 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
TPM1-212ENST00000558347 Q8N814 137 aa6.75□□□□□ -1.33
TPM1-212ENST00000558347 IGLV10-54A0A075B6I4 117 aa6.74□□□□□ -1.33
TPM1-212ENST00000558347 LECT2O14960 151 aa6.74□□□□□ -1.33
TPM1-212ENST00000558347 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms