RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 Q6ZRP5 223 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 Q8N3U1 123 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 Q8N814 137 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 X6R8D5 127 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 GVQW2A0A096LPI5 108 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-207ENST00000558335 IGKV3OR2-268A0A0C4DH90 116 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 H3BNG1 76 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 PRM2P04554 102 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 SPART-AS1P0CW21 52 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 DEFB130BP0DP73 79 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 DEFB130AP0DP74 79 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 FAM229BQ4G0N7 80 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 LINC01554Q52M75 96 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 LELP1Q5T871 98 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 KRTAP1-3Q8IUG1 177 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
GABPB1-207ENST00000558335 A0A087WYN8 130 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 A0A0J9YWU9 116 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 HCG22E2RYF7 251 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 H0Y9J4 135 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 IGHV4-30-4P0DP06 118 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 REG3AQ06141 175 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 CHCHD10Q8WYQ3 142 aaPredicted RBP3.77□□□□□ -1.81
GABPB1-207ENST00000558335 FAM218AQ96MZ4 157 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 Q9HAA7 133 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 CSPG4Q6UVK1 2322 aa3.77□□□□□ -1.81
GABPB1-207ENST00000558335 LAMA5O15230 3695 aa3.76□□□□□ -1.81
GABPB1-207ENST00000558335 CHKB-CPT1BH3BT56 60 aa3.76□□□□□ -1.81
GABPB1-207ENST00000558335 BPY2O14599 106 aa3.76□□□□□ -1.81
GABPB1-207ENST00000558335 PSCAO43653 123 aa3.76□□□□□ -1.81
GABPB1-207ENST00000558335 ANGP03950 147 aaKnown RBP3.76□□□□□ -1.81
GABPB1-207ENST00000558335 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
GABPB1-207ENST00000558335 Q75L30 129 aa3.76□□□□□ -1.81
GABPB1-207ENST00000558335 LOC101927531A0A1B0GV80 90 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 C16orf90A8MZG2 172 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 C3orf84H3BNL1 204 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 KRTAP10-9P60411 292 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
GABPB1-207ENST00000558335 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 SORL1Q92673 2214 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 PKD1L2Q7Z442 2459 aa3.75□□□□□ -1.81
GABPB1-207ENST00000558335 CACNA1AO00555 2505 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 LCE6AA0A183 80 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 TNP2Q05952 138 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 SPAG11BQ08648 103 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 ITPR1Q14643 2758 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 C9orf116Q5BN46 136 aaPredicted RBP3.74□□□□□ -1.81
GABPB1-207ENST00000558335 Q5VV11 94 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 C1orf64Q8NEQ6 169 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
GABPB1-207ENST00000558335 CREBBPQ92793 2442 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 TRAV10A0A0B4J240 114 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 J3QKU1 62 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 NCR3O14931 201 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 PSPHP1O15172 72 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 IGLV6-57P01721 117 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 LINC00313P59037 77 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 EGFEM1PQ0D2K5 195 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 C6orf99Q4VX62 202 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 SCXQ7RTU7 201 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 BBC3Q96PG8 261 aaPredicted RBP3.73□□□□□ -1.81
GABPB1-207ENST00000558335 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
GABPB1-207ENST00000558335 NCOR2Q9Y618 2525 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 PRB1P04280 392 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 COX7BP24311 80 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 HAMPP81172 84 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 SPANXA2-OT1Q8N9U9 137 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 Q9BRP9 147 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 OCR1Q9BZK8 76 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 CELA1Q9UNI1 258 aa3.72□□□□□ -1.81
GABPB1-207ENST00000558335 PLA2G1BP04054 148 aaKnown RBP3.71□□□□□ -1.82
GABPB1-207ENST00000558335 PRR3P79522 188 aaKnown RBP3.71□□□□□ -1.82
GABPB1-207ENST00000558335 KRTAP1-1Q07627 177 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 Q6ZQT0 140 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 MDFIQ99750 246 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 WFDC10AQ9H1F0 79 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 SPG11Q96JI7 2443 aa3.71□□□□□ -1.82
GABPB1-207ENST00000558335 UBR5O95071 2799 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-207ENST00000558335 A6NED7 52 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 CYSRT1A8MQ03 144 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 H3BPC8 53 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 PLA2G2AP14555 144 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 WFDC9Q8NEX5 89 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 CHD8Q9HCK8 2581 aa3.7□□□□□ -1.82
GABPB1-207ENST00000558335 MYO18BQ8IUG5 2567 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 ACACBO00763 2458 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 NAV2Q8IVL1 2488 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 IGSF10Q6WRI0 2623 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-207ENST00000558335 SLPIP03973 132 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
GABPB1-207ENST00000558335 DEFB135Q30KP9 77 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 Q8NAQ8 132 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 CAMK2N2Q96S95 79 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms