RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CRPP02741 224 aa4.88□□□□□ -1.63
MARK3-212ENST00000558223 LINC00158P58513 81 aa4.88□□□□□ -1.63
MARK3-212ENST00000558223 CKS1BP61024 79 aa4.88□□□□□ -1.63
MARK3-212ENST00000558223 ACANP16112 2415 aa4.88□□□□□ -1.63
MARK3-212ENST00000558223 WNK1Q9H4A3 2382 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 C9JAW5 83 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 H7C2G1 150 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 NDUFC2O95298 119 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
MARK3-212ENST00000558223 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 CASC10Q5T4H9 136 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 SND1-IT1Q9HBX3 110 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
MARK3-212ENST00000558223 KLK5Q9Y337 293 aaPredicted RBP4.87□□□□□ -1.63
MARK3-212ENST00000558223 TENM4Q6N022 2769 aa4.86□□□□□ -1.63
MARK3-212ENST00000558223 A0A1B0GX51 115 aa4.86□□□□□ -1.63
MARK3-212ENST00000558223 ANGP03950 147 aaKnown RBP4.86□□□□□ -1.63
MARK3-212ENST00000558223 C5orf38Q86SI9 138 aa4.86□□□□□ -1.63
MARK3-212ENST00000558223 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
MARK3-212ENST00000558223 MTORP42345 2549 aa4.86□□□□□ -1.63
MARK3-212ENST00000558223 FASNP49327 2511 aaKnown RBP4.86□□□□□ -1.63
MARK3-212ENST00000558223 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 H3BQ85 93 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 ACYP1P07311 99 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 XCL1P47992 114 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 C2orf82Q6UX34 121 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 PRR34Q9NV39 138 aa4.85□□□□□ -1.63
MARK3-212ENST00000558223 ITPR2Q14571 2701 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 A0A096LPF7 62 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
MARK3-212ENST00000558223 LINC00269Q8N2A0 174 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 C7orf33Q8WU49 177 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 CSMD1Q96PZ7 3565 aa4.84□□□□□ -1.63
MARK3-212ENST00000558223 C2CD3Q4AC94 2353 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 GVQW2A0A096LPI5 108 aaPredicted RBP4.83□□□□□ -1.64
MARK3-212ENST00000558223 DNAL4O96015 105 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 NPC2P61916 151 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 LYPD5Q6UWN5 251 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 SOSTDC1Q6X4U4 206 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 DAND5Q8N907 189 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 UBE2WQ96B02 151 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 TMEM126AQ9H061 195 aa4.83□□□□□ -1.64
MARK3-212ENST00000558223 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 A0A0J9YWU9 116 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 EPM2AB3EWF7 344 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 INAFM2P0DMQ5 153 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 CCL18P55774 89 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 C15orf53Q8NAA6 179 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 NOTCH2Q04721 2471 aa4.82□□□□□ -1.64
MARK3-212ENST00000558223 SVEP1Q4LDE5 3571 aa4.81□□□□□ -1.64
MARK3-212ENST00000558223 NDUFC2-KCTD14E9PQ53 114 aa4.81□□□□□ -1.64
MARK3-212ENST00000558223 DEFB4AO15263 64 aa4.81□□□□□ -1.64
MARK3-212ENST00000558223 HTN3P15516 51 aa4.81□□□□□ -1.64
MARK3-212ENST00000558223 KPRPQ5T749 579 aaPredicted RBP4.81□□□□□ -1.64
MARK3-212ENST00000558223 FN1P02751 2386 aaKnown RBP4.8□□□□□ -1.64
MARK3-212ENST00000558223 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
MARK3-212ENST00000558223 SPAG11BQ08648 103 aa4.8□□□□□ -1.64
MARK3-212ENST00000558223 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
MARK3-212ENST00000558223 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 TRAV10A0A0B4J240 114 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 LINC01556Q5JQF7 62 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 Q8N377 158 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 CLEC2BQ92478 149 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 KLK12Q9UKR0 248 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 NOTCH3Q9UM47 2321 aa4.79□□□□□ -1.64
MARK3-212ENST00000558223 SETXQ7Z333 2677 aaKnown RBP4.78□□□□□ -1.64
MARK3-212ENST00000558223 DEFB131BA0A096LNP1 70 aa4.78□□□□□ -1.64
MARK3-212ENST00000558223 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
MARK3-212ENST00000558223 LINC00337Q8N6G1 96 aa4.78□□□□□ -1.64
MARK3-212ENST00000558223 SMIM11BQ8TCY0 68 aa4.78□□□□□ -1.64
MARK3-212ENST00000558223 RMI2Q96E14 147 aa4.78□□□□□ -1.64
MARK3-212ENST00000558223 SETD2Q9BYW2 2564 aaPredicted RBP4.78□□□□□ -1.64
MARK3-212ENST00000558223 HECTD1Q9ULT8 2610 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 NSD1Q96L73 2696 aaPredicted RBP4.77□□□□□ -1.65
MARK3-212ENST00000558223 CYSRT1A8MQ03 144 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 Q6Q795 121 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 CLPSL2Q6UWE3 100 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 ENHOQ6UWT2 76 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 CSMD2Q7Z408 3487 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 NF1P21359 2839 aa4.77□□□□□ -1.65
MARK3-212ENST00000558223 JMJD1CQ15652 2540 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 TRBV7-6A0A0J9YX20 115 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 TMEM256-PLSCR3K7ERE1 68 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 S100A7L2Q5SY68 101 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 Q6ZTC4 211 aa4.76□□□□□ -1.65
MARK3-212ENST00000558223 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms