RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 RPL38P63173 70 aaKnown RBP2.63□□□□□ -1.99
ZEB1-210ENST00000557827 AHCTF1Q8WYP5 2266 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 MUC2Q02817 5179 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 MGAM2Q2M2H8 2515 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 ZANQ9Y493 2812 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 S100A3P33764 101 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 GNG2P59768 71 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 Q6ZQY7 126 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 C5orf56Q8N8D9 126 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 COX14Q96I36 57 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 ANKRD36A6QL64 1941 aa2.62□□□□□ -1.99
ZEB1-210ENST00000557827 NCR3O14931 201 aa2.61□□□□□ -1.99
ZEB1-210ENST00000557827 S100A8P05109 93 aa2.61□□□□□ -1.99
ZEB1-210ENST00000557827 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
ZEB1-210ENST00000557827 WNK1Q9H4A3 2382 aa2.61□□□□□ -1.99
ZEB1-210ENST00000557827 ACANP16112 2415 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 F5P12259 2224 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 TRAV30A0A087WSZ9 112 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 SPINK8P0C7L1 97 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 LYNX1P0DP58 116 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 UBE2D1P51668 147 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 C5orf38Q86SI9 138 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 LINC00208Q96KT6 92 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 APC2O95996 2303 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 ACACAQ13085 2346 aa2.6□□□□□ -1.99
ZEB1-210ENST00000557827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.6□□□□□ -1.998e-10■■■■□ 20.2
ZEB1-210ENST00000557827 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
ZEB1-210ENST00000557827 A0A087WXM4 84 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 GNGT2O14610 69 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 CCL8P80075 99 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 C6orf52Q5T4I8 152 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 COMMD6Q7Z4G1 85 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 CCL19Q99731 98 aa2.59□□□□□ -1.99
ZEB1-210ENST00000557827 MED12Q93074 2177 aa2.59□□□□□ -2
ZEB1-210ENST00000557827 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 FAM24AA6NFZ4 105 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 EFNA4P52798 201 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 KRTAP12-4P60329 112 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 Q86TA4 180 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 ACBD7Q8N6N7 88 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 ANK2Q01484 3957 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 TENM3Q9P273 2699 aa2.58□□□□□ -2
ZEB1-210ENST00000557827 HCG22E2RYF7 251 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 CAV3P56539 151 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 SMIM11AP58511 58 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 ZNF818PQ6ZRF7 136 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 C20orf197Q8N268 126 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 LCN9Q8WX39 176 aa2.57□□□□□ -2
ZEB1-210ENST00000557827 C10orf142B7Z368 130 aa2.56□□□□□ -2
ZEB1-210ENST00000557827 IFI6P09912 130 aa2.56□□□□□ -2
ZEB1-210ENST00000557827 AQP10Q96PS8 301 aa2.56□□□□□ -2
ZEB1-210ENST00000557827 HERC1Q15751 4861 aa2.56□□□□□ -2
ZEB1-210ENST00000557827 SPTY2D1-AS1A0A0U1RR47 76 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 HMGN4O00479 90 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 CCL3L1P16619 93 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 ZNF56Q15929 161 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 LINC00575Q6W349 94 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 S100ZQ8WXG8 99 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 TENM2Q9NT68 2774 aa2.55□□□□□ -2
ZEB1-210ENST00000557827 UBE2L5PA0A1B0GUS4 154 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 H0YGG7 62 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 HMGN2P05204 90 aaKnown RBP2.54□□□□□ -2
ZEB1-210ENST00000557827 UBE2L3P68036 154 aaKnown RBP2.54□□□□□ -2
ZEB1-210ENST00000557827 TTC9CQ8N5M4 171 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 DPH3P1Q9H4G8 78 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 KNL1Q8NG31 2342 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 GOLGA4Q13439 2230 aaKnown RBP2.54□□□□□ -2
ZEB1-210ENST00000557827 MXRA5Q9NR99 2828 aa2.54□□□□□ -2
ZEB1-210ENST00000557827 SIX6O95475 246 aa2.53□□□□□ -2
ZEB1-210ENST00000557827 STATHP02808 62 aa2.53□□□□□ -2
ZEB1-210ENST00000557827 S100A10P60903 97 aa2.53□□□□□ -2
ZEB1-210ENST00000557827 SNRPGP62308 76 aaKnown RBP2.53□□□□□ -2
ZEB1-210ENST00000557827 NCMAPQ5T1S8 102 aa2.53□□□□□ -2
ZEB1-210ENST00000557827 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 URB1O60287 2271 aaKnown RBP2.52□□□□□ -2.01
ZEB1-210ENST00000557827 TRBV30A0A0K0K1B3 111 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 CLPSL1A2RUU4 121 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 M0R143 59 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 SSSCA1O60232 199 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 TRAPPC2P0DI81 140 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 TRAPPC2BP0DI82 140 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 ATP5EP56381 51 aaPredicted RBP2.52□□□□□ -2.01
ZEB1-210ENST00000557827 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 Q6ZSA8 131 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 PPP1R1CQ8WVI7 109 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 BET1LQ9NYM9 111 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 LINC00312Q9Y6C7 94 aa2.52□□□□□ -2.01
ZEB1-210ENST00000557827 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
ZEB1-210ENST00000557827 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
ZEB1-210ENST00000557827 KLKP1Q107X0 134 aa2.51□□□□□ -2.01
ZEB1-210ENST00000557827 DEFB133Q30KQ1 61 aa2.51□□□□□ -2.01
ZEB1-210ENST00000557827 COX7B2Q8TF08 81 aa2.51□□□□□ -2.01
ZEB1-210ENST00000557827 WFDC6Q9BQY6 131 aa2.51□□□□□ -2.01
ZEB1-210ENST00000557827 A0A1W2PPM0 123 aa2.5□□□□□ -2.01
ZEB1-210ENST00000557827 CPSF4LA6NMK7 179 aaKnown RBP2.5□□□□□ -2.01
ZEB1-210ENST00000557827 TMEM262E9PQX1 116 aa2.5□□□□□ -2.01
ZEB1-210ENST00000557827 DEFB110Q30KQ9 67 aa2.5□□□□□ -2.01
ZEB1-210ENST00000557827 ZNF469Q96JG9 3925 aaPredicted RBP2.5□□□□□ -2.01
ZEB1-210ENST00000557827 TRBV7-1A0A0A6YYK4 115 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms