RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
CHD8-211ENST00000556833 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.06
CHD8-211ENST00000556833 Q8NBF4 154 aa8.4□□□□□ -1.06
CHD8-211ENST00000556833 NCR3O14931 201 aa8.39□□□□□ -1.07
CHD8-211ENST00000556833 LINC00337Q8N6G1 96 aa8.39□□□□□ -1.07
CHD8-211ENST00000556833 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
CHD8-211ENST00000556833 TMEM218A2RU14 115 aa8.38□□□□□ -1.07
CHD8-211ENST00000556833 COX17Q14061 63 aa8.38□□□□□ -1.07
CHD8-211ENST00000556833 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
CHD8-211ENST00000556833 CLLU1Q5K131 121 aa8.37□□□□□ -1.07
CHD8-211ENST00000556833 BAGE3Q86Y29 109 aa8.37□□□□□ -1.07
CHD8-211ENST00000556833 HBDP02042 147 aa8.36□□□□□ -1.07
CHD8-211ENST00000556833 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
CHD8-211ENST00000556833 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
CHD8-211ENST00000556833 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
CHD8-211ENST00000556833 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
CHD8-211ENST00000556833 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
CHD8-211ENST00000556833 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
CHD8-211ENST00000556833 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
CHD8-211ENST00000556833 LINC00614P0C842 121 aa8.33□□□□□ -1.08
CHD8-211ENST00000556833 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
CHD8-211ENST00000556833 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
CHD8-211ENST00000556833 SEC11CQ9BY50 192 aa8.33□□□□□ -1.08
CHD8-211ENST00000556833 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
CHD8-211ENST00000556833 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 PRYO14603 147 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 ATP6V1G1O75348 118 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 COX19Q49B96 90 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 UQCC3Q6UW78 93 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
CHD8-211ENST00000556833 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
CHD8-211ENST00000556833 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
CHD8-211ENST00000556833 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
CHD8-211ENST00000556833 CTAG1AP78358 180 aa8.31□□□□□ -1.08
CHD8-211ENST00000556833 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
CHD8-211ENST00000556833 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
CHD8-211ENST00000556833 MOBPQ13875 183 aa8.3□□□□□ -1.08
CHD8-211ENST00000556833 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
CHD8-211ENST00000556833 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
CHD8-211ENST00000556833 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
CHD8-211ENST00000556833 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
CHD8-211ENST00000556833 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
CHD8-211ENST00000556833 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
CHD8-211ENST00000556833 IFITM2Q01629 132 aa8.27□□□□□ -1.09
CHD8-211ENST00000556833 SPINK1P00995 79 aa8.26□□□□□ -1.09
CHD8-211ENST00000556833 SPRR1AP35321 89 aa8.26□□□□□ -1.09
CHD8-211ENST00000556833 KCNQ1DNQ9H478 68 aa8.26□□□□□ -1.09
CHD8-211ENST00000556833 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
CHD8-211ENST00000556833 H0Y8G0 127 aa8.25□□□□□ -1.09
CHD8-211ENST00000556833 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
CHD8-211ENST00000556833 RHEBQ15382 184 aa8.25□□□□□ -1.09
CHD8-211ENST00000556833 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
CHD8-211ENST00000556833 Q8N377 158 aa8.24□□□□□ -1.09
CHD8-211ENST00000556833 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
CHD8-211ENST00000556833 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
CHD8-211ENST00000556833 B5MCH6 92 aa8.22□□□□□ -1.09
CHD8-211ENST00000556833 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
CHD8-211ENST00000556833 TSPEAR-AS2P59090 65 aa8.21□□□□□ -1.1
CHD8-211ENST00000556833 Q9BRP9 147 aa8.21□□□□□ -1.1
CHD8-211ENST00000556833 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.1
CHD8-211ENST00000556833 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
CHD8-211ENST00000556833 DDTP30046 118 aa8.2□□□□□ -1.1
CHD8-211ENST00000556833 HERV-K104P63124 156 aa8.2□□□□□ -1.1
CHD8-211ENST00000556833 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
CHD8-211ENST00000556833 S100A12P80511 92 aa8.19□□□□□ -1.1
CHD8-211ENST00000556833 FAM19A2Q8N3H0 131 aa8.19□□□□□ -1.1
CHD8-211ENST00000556833 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
CHD8-211ENST00000556833 XP32Q5T750 250 aa8.18□□□□□ -1.1
CHD8-211ENST00000556833 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
CHD8-211ENST00000556833 SLC25A20O43772 301 aa8.17□□□□□ -1.1
CHD8-211ENST00000556833 NPC2P61916 151 aa8.17□□□□□ -1.1
CHD8-211ENST00000556833 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
CHD8-211ENST00000556833 APOC3P02656 99 aa8.16□□□□□ -1.1
CHD8-211ENST00000556833 Q6ZRX8 168 aa8.16□□□□□ -1.1
CHD8-211ENST00000556833 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
CHD8-211ENST00000556833 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
CHD8-211ENST00000556833 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
CHD8-211ENST00000556833 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
CHD8-211ENST00000556833 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
CHD8-211ENST00000556833 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
CHD8-211ENST00000556833 LINC00587B1AMM8 73 aa8.14□□□□□ -1.11
CHD8-211ENST00000556833 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
CHD8-211ENST00000556833 LEPROTO15243 131 aa8.13□□□□□ -1.11
CHD8-211ENST00000556833 HSBP1O75506 76 aa8.13□□□□□ -1.11
CHD8-211ENST00000556833 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
CHD8-211ENST00000556833 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
CHD8-211ENST00000556833 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
CHD8-211ENST00000556833 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
CHD8-211ENST00000556833 C9orf92A6NGG3 77 aa8.12□□□□□ -1.11
CHD8-211ENST00000556833 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
CHD8-211ENST00000556833 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
CHD8-211ENST00000556833 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
CHD8-211ENST00000556833 PCOTHQ58A44 107 aa8.11□□□□□ -1.11
CHD8-211ENST00000556833 J3QQQ9 107 aa8.1□□□□□ -1.11
CHD8-211ENST00000556833 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
CHD8-211ENST00000556833 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
CHD8-211ENST00000556833 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
CHD8-211ENST00000556833 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
CHD8-211ENST00000556833 LOC107984156A0A0G2JMH3 177 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms