RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
SNX6-208ENST00000556712 NKAPP1Q8N9T2 125 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 VPREB1P12018 145 aa6.27□□□□□ -1.41
SNX6-208ENST00000556712 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
SNX6-208ENST00000556712 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 LINC00158P58513 81 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 COX17Q14061 63 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 MEIG1Q5JSS6 88 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 SFTA2Q6UW10 78 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
SNX6-208ENST00000556712 ZNF861PO60384 105 aa6.25□□□□□ -1.41
SNX6-208ENST00000556712 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
SNX6-208ENST00000556712 BCE1O60756 84 aa6.24□□□□□ -1.41
SNX6-208ENST00000556712 DPM2O94777 84 aa6.24□□□□□ -1.41
SNX6-208ENST00000556712 IGKCP01834 107 aa6.24□□□□□ -1.41
SNX6-208ENST00000556712 PLNP26678 52 aa6.24□□□□□ -1.41
SNX6-208ENST00000556712 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
SNX6-208ENST00000556712 LEPROTO15243 131 aa6.23□□□□□ -1.41
SNX6-208ENST00000556712 MIR7-3HGQ8N6C7 128 aa6.23□□□□□ -1.41
SNX6-208ENST00000556712 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
SNX6-208ENST00000556712 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
SNX6-208ENST00000556712 TMEM238C9JI98 176 aa6.22□□□□□ -1.41
SNX6-208ENST00000556712 HERV-K104P63124 156 aa6.22□□□□□ -1.41
SNX6-208ENST00000556712 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
SNX6-208ENST00000556712 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 J3QQQ9 107 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 RPL28P46779 137 aaKnown RBP6.21□□□□□ -1.42
SNX6-208ENST00000556712 UBE2AP49459 152 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 HERVK_113P61574 105 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 PRLHP81277 87 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 DAND5Q8N907 189 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
SNX6-208ENST00000556712 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 NCR3O14931 201 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 ATP6V1G1O75348 118 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 BOD1L2Q8IYS8 172 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 TMEM126AQ9H061 195 aa6.2□□□□□ -1.42
SNX6-208ENST00000556712 M0R378 163 aa6.19□□□□□ -1.42
SNX6-208ENST00000556712 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
SNX6-208ENST00000556712 FAM19A1Q7Z5A9 133 aa6.19□□□□□ -1.42
SNX6-208ENST00000556712 A0A087X002 238 aa6.18□□□□□ -1.42
SNX6-208ENST00000556712 E9PLD3 99 aa6.17□□□□□ -1.42
SNX6-208ENST00000556712 C3orf79P0CE67 100 aa6.17□□□□□ -1.42
SNX6-208ENST00000556712 NMUP48645 174 aa6.17□□□□□ -1.42
SNX6-208ENST00000556712 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
SNX6-208ENST00000556712 LINC01545Q5VT33 79 aa6.17□□□□□ -1.42
SNX6-208ENST00000556712 ANAPC11Q9NYG5 84 aa6.17□□□□□ -1.42
SNX6-208ENST00000556712 LINC00587B1AMM8 73 aa6.16□□□□□ -1.42
SNX6-208ENST00000556712 KRTDAPP60985 99 aa6.16□□□□□ -1.42
SNX6-208ENST00000556712 NPC2P61916 151 aa6.16□□□□□ -1.42
SNX6-208ENST00000556712 PET117Q6UWS5 81 aa6.16□□□□□ -1.42
SNX6-208ENST00000556712 RPL13AP40429 203 aaKnown RBP6.15□□□□□ -1.42
SNX6-208ENST00000556712 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.42
SNX6-208ENST00000556712 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 A0A0J9YXY3 114 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
SNX6-208ENST00000556712 ADAMTSL4-AS1Q5T5F5 129 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
SNX6-208ENST00000556712 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
SNX6-208ENST00000556712 PRYO14603 147 aa6.13□□□□□ -1.43
SNX6-208ENST00000556712 MIEN1Q9BRT3 115 aa6.13□□□□□ -1.43
SNX6-208ENST00000556712 HIGD2AQ9BW72 106 aa6.13□□□□□ -1.43
SNX6-208ENST00000556712 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
SNX6-208ENST00000556712 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
SNX6-208ENST00000556712 CRYGAP11844 174 aa6.12□□□□□ -1.43
SNX6-208ENST00000556712 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
SNX6-208ENST00000556712 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
SNX6-208ENST00000556712 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
SNX6-208ENST00000556712 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
SNX6-208ENST00000556712 S100A1P23297 94 aa6.11□□□□□ -1.43
SNX6-208ENST00000556712 SPRR1AP35321 89 aa6.11□□□□□ -1.43
SNX6-208ENST00000556712 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
SNX6-208ENST00000556712 LITAFQ99732 161 aa6.11□□□□□ -1.43
SNX6-208ENST00000556712 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
SNX6-208ENST00000556712 DDTP30046 118 aa6.1□□□□□ -1.43
SNX6-208ENST00000556712 ANKRD39Q53RE8 183 aa6.1□□□□□ -1.43
SNX6-208ENST00000556712 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
SNX6-208ENST00000556712 SPANXB1Q9NS25 103 aaPredicted RBP6.1□□□□□ -1.43
SNX6-208ENST00000556712 TRBV10-2A0A0K0K1G8 114 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 C20orf202A1L168 122 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 NDUFC2O95298 119 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 TSPAN13O95857 204 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 FAM229BQ4G0N7 80 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 LINC00337Q8N6G1 96 aa6.09□□□□□ -1.43
SNX6-208ENST00000556712 LRP2P98164 4655 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms