RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 PKD1P98161 4303 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 GVQW2A0A096LPI5 108 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-243ENST00000556671 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 NUPR1O60356 82 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 CKS1BP61024 79 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 RPL18AQ02543 176 aaKnown RBP2.97□□□□□ -1.93
ATXN3-243ENST00000556671 PMVKQ15126 192 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 LINC00242Q5T6M2 205 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 Q5VSD8 79 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 Q6ZRU5 148 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 FAM19A2Q8N3H0 131 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 CHAC1Q9BUX1 264 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-243ENST00000556671 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.93
ATXN3-243ENST00000556671 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 NDUFA1O15239 70 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 HBDP02042 147 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 UBE2D1P51668 147 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 HNRNPA3P51991 378 aaKnown RBP2.96□□□□□ -1.94
ATXN3-243ENST00000556671 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ATXN3-243ENST00000556671 HERVK_113P63121 156 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 SEC11AP67812 179 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 Q8NBF4 154 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 AMELXQ99217 191 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 CST9LQ9H4G1 147 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
ATXN3-243ENST00000556671 A0A096LNI7 61 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 PANO1I0J062 215 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 ATP5LO75964 103 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 C9orf116Q5BN46 136 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-243ENST00000556671 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 CDKN2A-AS1Q9UH64 79 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
ATXN3-243ENST00000556671 TINCRA0A1B0GVN0 87 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 LINC01546A6NGU7 62 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 H3BRM9 83 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
ATXN3-243ENST00000556671 Q8N377 158 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
ATXN3-243ENST00000556671 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
ATXN3-243ENST00000556671 A8MU10 97 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 PFN2P35080 140 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 SEC61GP60059 68 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 Q6ZSA8 131 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-243ENST00000556671 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-243ENST00000556671 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
ATXN3-243ENST00000556671 A0A096LNJ9 63 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 KIAA0087Q14695 138 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 Q8IZM0 81 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 LINC01561Q8N1V8 128 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
ATXN3-243ENST00000556671 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
ATXN3-243ENST00000556671 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 F8VRH5 84 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 LINC00158P58513 81 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 UBE2BP63146 152 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 PHF5AQ7RTV0 110 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms