RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HIST1H2BBP33778 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BDP58876 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BCP62807 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST2H2BEQ16778 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BHQ93079 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BNQ99877 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BMQ99879 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 VPREB1P12018 145 aa8.25□□□□□ -1.09
SNX6-203ENST00000555416 TSPEAR-AS2P59090 65 aa8.25□□□□□ -1.09
SNX6-203ENST00000555416 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
SNX6-203ENST00000555416 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
SNX6-203ENST00000555416 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
SNX6-203ENST00000555416 COX17Q14061 63 aa8.23□□□□□ -1.09
SNX6-203ENST00000555416 HSPB8Q9UJY1 196 aa8.23□□□□□ -1.09
SNX6-203ENST00000555416 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
SNX6-203ENST00000555416 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
SNX6-203ENST00000555416 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
SNX6-203ENST00000555416 ZNF861PO60384 105 aa8.21□□□□□ -1.1
SNX6-203ENST00000555416 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
SNX6-203ENST00000555416 SMIM13P0DJ93 91 aa8.21□□□□□ -1.1
SNX6-203ENST00000555416 LINC00158P58513 81 aa8.21□□□□□ -1.1
SNX6-203ENST00000555416 BCE1O60756 84 aa8.2□□□□□ -1.1
SNX6-203ENST00000555416 DPM2O94777 84 aa8.2□□□□□ -1.1
SNX6-203ENST00000555416 PLNP26678 52 aa8.2□□□□□ -1.1
SNX6-203ENST00000555416 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
SNX6-203ENST00000555416 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
SNX6-203ENST00000555416 LEPROTO15243 131 aa8.19□□□□□ -1.1
SNX6-203ENST00000555416 IGLV1-50A0A075B6I6 118 aa8.18□□□□□ -1.1
SNX6-203ENST00000555416 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
SNX6-203ENST00000555416 IGKCP01834 107 aa8.18□□□□□ -1.1
SNX6-203ENST00000555416 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
SNX6-203ENST00000555416 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
SNX6-203ENST00000555416 MIR7-3HGQ8N6C7 128 aa8.17□□□□□ -1.1
SNX6-203ENST00000555416 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
SNX6-203ENST00000555416 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
SNX6-203ENST00000555416 J3QQQ9 107 aa8.16□□□□□ -1.1
SNX6-203ENST00000555416 HERV-K104P63124 156 aa8.16□□□□□ -1.1
SNX6-203ENST00000555416 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
SNX6-203ENST00000555416 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
SNX6-203ENST00000555416 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
SNX6-203ENST00000555416 M0R378 163 aa8.15□□□□□ -1.1
SNX6-203ENST00000555416 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
SNX6-203ENST00000555416 DAND5Q8N907 189 aa8.15□□□□□ -1.1
SNX6-203ENST00000555416 COA6Q5JTJ3 125 aaKnown RBP8.14□□□□□ -1.11
SNX6-203ENST00000555416 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
SNX6-203ENST00000555416 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
SNX6-203ENST00000555416 PRLHP81277 87 aa8.13□□□□□ -1.11
SNX6-203ENST00000555416 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
SNX6-203ENST00000555416 ANAPC11Q9NYG5 84 aa8.13□□□□□ -1.11
SNX6-203ENST00000555416 NCR3O14931 201 aa8.12□□□□□ -1.11
SNX6-203ENST00000555416 ATP6V1G1O75348 118 aa8.12□□□□□ -1.11
SNX6-203ENST00000555416 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
SNX6-203ENST00000555416 UBE2AP49459 152 aa8.12□□□□□ -1.11
SNX6-203ENST00000555416 HERVK_113P61574 105 aa8.12□□□□□ -1.11
SNX6-203ENST00000555416 A0A087X002 238 aa8.11□□□□□ -1.11
SNX6-203ENST00000555416 E9PLD3 99 aa8.11□□□□□ -1.11
SNX6-203ENST00000555416 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SNX6-203ENST00000555416 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
SNX6-203ENST00000555416 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
SNX6-203ENST00000555416 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
SNX6-203ENST00000555416 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 NMUP48645 174 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
SNX6-203ENST00000555416 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 KRTDAPP60985 99 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 TTTY13Q9BZ97 58 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 LRP2P98164 4655 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
SNX6-203ENST00000555416 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
SNX6-203ENST00000555416 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
SNX6-203ENST00000555416 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
SNX6-203ENST00000555416 NPC2P61916 151 aa8.06□□□□□ -1.12
SNX6-203ENST00000555416 LITAFQ99732 161 aa8.06□□□□□ -1.12
SNX6-203ENST00000555416 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
SNX6-203ENST00000555416 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
SNX6-203ENST00000555416 PRYO14603 147 aa8.04□□□□□ -1.12
SNX6-203ENST00000555416 S100A1P23297 94 aa8.04□□□□□ -1.12
SNX6-203ENST00000555416 SPRR1AP35321 89 aa8.04□□□□□ -1.12
SNX6-203ENST00000555416 CRYGAP11844 174 aa8.03□□□□□ -1.12
SNX6-203ENST00000555416 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
SNX6-203ENST00000555416 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
SNX6-203ENST00000555416 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
SNX6-203ENST00000555416 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 DDTP30046 118 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 TYMSOSQ8TAI1 123 aa8.01□□□□□ -1.13
SNX6-203ENST00000555416 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
SNX6-203ENST00000555416 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
SNX6-203ENST00000555416 NDUFC2O95298 119 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 TSPAN13O95857 204 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 IGLV6-57P01721 117 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms