RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
SHMT2-213ENST00000554600 LINC00158P58513 81 aa6.48□□□□□ -1.37
SHMT2-213ENST00000554600 ODF1Q14990 250 aa6.48□□□□□ -1.37
SHMT2-213ENST00000554600 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
SHMT2-213ENST00000554600 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
SHMT2-213ENST00000554600 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
SHMT2-213ENST00000554600 COX17Q14061 63 aa6.47□□□□□ -1.37
SHMT2-213ENST00000554600 MEIG1Q5JSS6 88 aa6.47□□□□□ -1.37
SHMT2-213ENST00000554600 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
SHMT2-213ENST00000554600 PLNP26678 52 aa6.46□□□□□ -1.38
SHMT2-213ENST00000554600 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
SHMT2-213ENST00000554600 RPL24P83731 157 aaKnown RBP6.46□□□□□ -1.38
SHMT2-213ENST00000554600 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
SHMT2-213ENST00000554600 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 ZNF861PO60384 105 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 DPM2O94777 84 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 RPL28P46779 137 aaKnown RBP6.45□□□□□ -1.38
SHMT2-213ENST00000554600 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
SHMT2-213ENST00000554600 BCE1O60756 84 aa6.44□□□□□ -1.38
SHMT2-213ENST00000554600 SMIM13P0DJ93 91 aa6.44□□□□□ -1.38
SHMT2-213ENST00000554600 PMCHL2Q9BQD1 86 aa6.44□□□□□ -1.38
SHMT2-213ENST00000554600 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
SHMT2-213ENST00000554600 TNXBP22105 4242 aa6.43□□□□□ -1.38
SHMT2-213ENST00000554600 IGKCP01834 107 aa6.43□□□□□ -1.38
SHMT2-213ENST00000554600 VPREB1P12018 145 aa6.43□□□□□ -1.38
SHMT2-213ENST00000554600 UBE2AP49459 152 aa6.43□□□□□ -1.38
SHMT2-213ENST00000554600 HERVK_113P61574 105 aa6.43□□□□□ -1.38
SHMT2-213ENST00000554600 IGLV1-50A0A075B6I6 118 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 MYMXA0A1B0GTQ4 84 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 LEPROTO15243 131 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 AKR1D1P51857 326 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 HERV-K104P63124 156 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
SHMT2-213ENST00000554600 SYS1-DBNDD2H3BUS1 97 aa6.41□□□□□ -1.38
SHMT2-213ENST00000554600 S100A2P29034 98 aa6.41□□□□□ -1.38
SHMT2-213ENST00000554600 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
SHMT2-213ENST00000554600 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
SHMT2-213ENST00000554600 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 BOD1L2Q8IYS8 172 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 Q8NDZ9 215 aa6.4□□□□□ -1.38
SHMT2-213ENST00000554600 J3QQQ9 107 aa6.39□□□□□ -1.39
SHMT2-213ENST00000554600 RPL13AP40429 203 aaKnown RBP6.39□□□□□ -1.39
SHMT2-213ENST00000554600 PRLHP81277 87 aa6.39□□□□□ -1.39
SHMT2-213ENST00000554600 PET117Q6UWS5 81 aa6.39□□□□□ -1.39
SHMT2-213ENST00000554600 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
SHMT2-213ENST00000554600 LRP2P98164 4655 aa6.39□□□□□ -1.39
SHMT2-213ENST00000554600 M0R378 163 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 NCR3O14931 201 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 LINC01545Q5VT33 79 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 DAND5Q8N907 189 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
SHMT2-213ENST00000554600 C3orf79P0CE67 100 aa6.37□□□□□ -1.39
SHMT2-213ENST00000554600 NMUP48645 174 aa6.37□□□□□ -1.39
SHMT2-213ENST00000554600 KRTDAPP60985 99 aa6.37□□□□□ -1.39
SHMT2-213ENST00000554600 MIEN1Q9BRT3 115 aa6.36□□□□□ -1.39
SHMT2-213ENST00000554600 C20orf202A1L168 122 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 E9PLD3 99 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 CRYGAP11844 174 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 ANAPC11Q9NYG5 84 aa6.35□□□□□ -1.39
SHMT2-213ENST00000554600 NPC2P61916 151 aa6.34□□□□□ -1.39
SHMT2-213ENST00000554600 S100A12P80511 92 aa6.34□□□□□ -1.39
SHMT2-213ENST00000554600 A0A087X002 238 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 IGKV2D-26A0A0A0MRZ7 120 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 PRYO14603 147 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 LINC00518Q8N0U6 118 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
SHMT2-213ENST00000554600 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
SHMT2-213ENST00000554600 A0A0J9YXY3 114 aa6.31□□□□□ -1.4
SHMT2-213ENST00000554600 TSPAN13O95857 204 aa6.31□□□□□ -1.4
SHMT2-213ENST00000554600 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
SHMT2-213ENST00000554600 C12orf57Q99622 126 aa6.31□□□□□ -1.4
SHMT2-213ENST00000554600 DDTP30046 118 aa6.3□□□□□ -1.4
SHMT2-213ENST00000554600 S100A7L2Q5SY68 101 aa6.3□□□□□ -1.4
SHMT2-213ENST00000554600 LOC107984156A0A0G2JMH3 177 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 ZNF815PA8K554 130 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 FAM229BQ4G0N7 80 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 ADAMTSL4-AS1Q5T5F5 129 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 ARL17AQ8IVW1 177 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 KCNQ1DNQ9H478 68 aa6.29□□□□□ -1.4
SHMT2-213ENST00000554600 SPANXB1Q9NS25 103 aaPredicted RBP6.29□□□□□ -1.4
SHMT2-213ENST00000554600 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
SHMT2-213ENST00000554600 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
SHMT2-213ENST00000554600 PRR4Q16378 134 aa6.28□□□□□ -1.4
SHMT2-213ENST00000554600 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
SHMT2-213ENST00000554600 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
SHMT2-213ENST00000554600 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
SHMT2-213ENST00000554600 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
SHMT2-213ENST00000554600 TIMM17BO60830 172 aa6.27□□□□□ -1.41
SHMT2-213ENST00000554600 SCGB1D1O95968 90 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms