RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 Q8N814 137 aa9.87□□□□□ -0.83
ACTN1-211ENST00000553882 CYSRT1A8MQ03 144 aa9.87□□□□□ -0.83
ACTN1-211ENST00000553882 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
ACTN1-211ENST00000553882 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
ACTN1-211ENST00000553882 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
ACTN1-211ENST00000553882 TENM3Q9P273 2699 aa9.84□□□□□ -0.83
ACTN1-211ENST00000553882 RETNQ9HD89 108 aa9.84□□□□□ -0.83
ACTN1-211ENST00000553882 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
ACTN1-211ENST00000553882 PRR34Q9NV39 138 aa9.83□□□□□ -0.84
ACTN1-211ENST00000553882 STAB1Q9NY15 2570 aa9.82□□□□□ -0.84
ACTN1-211ENST00000553882 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
ACTN1-211ENST00000553882 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
ACTN1-211ENST00000553882 OXLD1Q5BKU9 147 aa9.82□□□□□ -0.84
ACTN1-211ENST00000553882 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
ACTN1-211ENST00000553882 F8P00451 2351 aa9.81□□□□□ -0.84
ACTN1-211ENST00000553882 TMEM256-PLSCR3K7ERE1 68 aa9.81□□□□□ -0.84
ACTN1-211ENST00000553882 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
ACTN1-211ENST00000553882 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
ACTN1-211ENST00000553882 A0A087WVE0 104 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 A0A1B0GX51 115 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 CCKP06307 115 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 HIGD2BQ4VC39 106 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
ACTN1-211ENST00000553882 FLNBO75369 2602 aaKnown RBP9.78□□□□□ -0.84
ACTN1-211ENST00000553882 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
ACTN1-211ENST00000553882 JMJD7-PLA2G4BH0Y9G9 81 aa9.77□□□□□ -0.85
ACTN1-211ENST00000553882 KPRPQ5T749 579 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-211ENST00000553882 NOTCH1P46531 2555 aa9.77□□□□□ -0.85
ACTN1-211ENST00000553882 Q6ZTC4 211 aa9.76□□□□□ -0.85
ACTN1-211ENST00000553882 FBN1P35555 2871 aaKnown RBP9.76□□□□□ -0.85
ACTN1-211ENST00000553882 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
ACTN1-211ENST00000553882 Q6JHZ5 121 aa9.76□□□□□ -0.85
ACTN1-211ENST00000553882 MAST4O15021 2626 aa9.76□□□□□ -0.85
ACTN1-211ENST00000553882 TRBV10-3A0A0K0K1G6 114 aa9.75□□□□□ -0.85
ACTN1-211ENST00000553882 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
ACTN1-211ENST00000553882 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
ACTN1-211ENST00000553882 KRTAP10-11P60412 298 aa9.74□□□□□ -0.85
ACTN1-211ENST00000553882 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
ACTN1-211ENST00000553882 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
ACTN1-211ENST00000553882 HIST1H4AP62805 103 aaKnown RBP9.73□□□□□ -0.85
ACTN1-211ENST00000553882 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
ACTN1-211ENST00000553882 Q6ZQY7 126 aa9.73□□□□□ -0.85
ACTN1-211ENST00000553882 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
ACTN1-211ENST00000553882 UQCRQO14949 82 aa9.72□□□□□ -0.85
ACTN1-211ENST00000553882 GVQW2A0A096LPI5 108 aaPredicted RBP9.71□□□□□ -0.85
ACTN1-211ENST00000553882 MUC7Q8TAX7 377 aa9.71□□□□□ -0.85
ACTN1-211ENST00000553882 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.86
ACTN1-211ENST00000553882 ATOX1O00244 68 aa9.7□□□□□ -0.86
ACTN1-211ENST00000553882 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
ACTN1-211ENST00000553882 ESRGQ1W209 222 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 Q6ZRU5 148 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 M0R2N4 97 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 COX7CP15954 63 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
ACTN1-211ENST00000553882 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-211ENST00000553882 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
ACTN1-211ENST00000553882 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
ACTN1-211ENST00000553882 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
ACTN1-211ENST00000553882 Q6ZQT0 140 aa9.67□□□□□ -0.86
ACTN1-211ENST00000553882 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
ACTN1-211ENST00000553882 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
ACTN1-211ENST00000553882 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
ACTN1-211ENST00000553882 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
ACTN1-211ENST00000553882 H3BNG1 76 aa9.65□□□□□ -0.86
ACTN1-211ENST00000553882 VPREB1P12018 145 aa9.65□□□□□ -0.86
ACTN1-211ENST00000553882 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
ACTN1-211ENST00000553882 CYSTM1Q9H1C7 97 aa9.64□□□□□ -0.87
ACTN1-211ENST00000553882 COX7BP24311 80 aa9.64□□□□□ -0.87
ACTN1-211ENST00000553882 EGFEM1PQ0D2K5 195 aa9.64□□□□□ -0.87
ACTN1-211ENST00000553882 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
ACTN1-211ENST00000553882 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
ACTN1-211ENST00000553882 NDUFC2-KCTD14E9PQ53 114 aa9.62□□□□□ -0.87
ACTN1-211ENST00000553882 Q6ZRP5 223 aa9.62□□□□□ -0.87
ACTN1-211ENST00000553882 LOC110117498A0A087WWA1 95 aa9.62□□□□□ -0.87
ACTN1-211ENST00000553882 ELOF1P60002 83 aaKnown RBP9.62□□□□□ -0.87
ACTN1-211ENST00000553882 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
ACTN1-211ENST00000553882 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
ACTN1-211ENST00000553882 SERP2Q8N6R1 65 aa9.61□□□□□ -0.87
ACTN1-211ENST00000553882 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
ACTN1-211ENST00000553882 COL6A5A8TX70 2615 aa9.61□□□□□ -0.87
ACTN1-211ENST00000553882 CRYGAP11844 174 aa9.6□□□□□ -0.87
ACTN1-211ENST00000553882 HAMPP81172 84 aa9.6□□□□□ -0.87
ACTN1-211ENST00000553882 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
ACTN1-211ENST00000553882 M0R378 163 aa9.59□□□□□ -0.87
ACTN1-211ENST00000553882 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
ACTN1-211ENST00000553882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-211ENST00000553882 GHRHP01286 108 aa9.57□□□□□ -0.88
ACTN1-211ENST00000553882 Q6ZVQ6 151 aa9.57□□□□□ -0.88
ACTN1-211ENST00000553882 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
ACTN1-211ENST00000553882 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-211ENST00000553882 SYCNQ0VAF6 134 aa9.57□□□□□ -0.88
ACTN1-211ENST00000553882 LINC01547P58512 204 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-211ENST00000553882 V9GYY9 64 aa9.56□□□□□ -0.88
ACTN1-211ENST00000553882 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
ACTN1-211ENST00000553882 TRBV7-4A0A0J9YYF1 115 aa9.54□□□□□ -0.88
ACTN1-211ENST00000553882 SERTAD4-AS1Q5TG53 156 aa9.54□□□□□ -0.88
ACTN1-211ENST00000553882 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms