RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 IGLC2P0DOY2 106 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 IGLC3P0DOY3 106 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 PIEZO2Q9H5I5 2752 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 NCOR1O75376 2440 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 SUPT6HQ7KZ85 1726 aaKnown RBP0.29□□□□□ -2.36
PCNX4-206ENST00000553513 PKD1L3Q7Z443 1732 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 CRYBG1Q9Y4K1 1723 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 RGPD2P0DJD1 1756 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 UBR5O95071 2799 aaPredicted RBP0.28□□□□□ -2.36
PCNX4-206ENST00000553513 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
PCNX4-206ENST00000553513 KIAA1551Q9HCM1 1747 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 A0A1B0GUT8 65 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 KLK9Q2XQG4 91 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 NMSQ5H8A3 153 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 UBE2D4Q9Y2X8 147 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 ABCA2Q9BZC7 2435 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 PTPN13Q12923 2485 aa0.28□□□□□ -2.36
PCNX4-206ENST00000553513 SAMD9Q5K651 1589 aa0.28□□□□□ -2.37
PCNX4-206ENST00000553513 K7EP34 96 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 CCL22O00626 93 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 GNG2P59768 71 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 RPL38P63173 70 aaKnown RBP0.27□□□□□ -2.37
PCNX4-206ENST00000553513 RABAC1Q9UI14 185 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
PCNX4-206ENST00000553513 PLIN4Q96Q06 1357 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 HIVEP3Q5T1R4 2406 aa0.27□□□□□ -2.37
PCNX4-206ENST00000553513 SPTA1P02549 2419 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 SNRPFP62306 86 aaKnown RBP0.26□□□□□ -2.37
PCNX4-206ENST00000553513 C9orf62Q8N4C0 152 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 ABCC3O15438 1527 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 SLIT1O75093 1534 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 TIAM2Q8IVF5 1701 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 CSPG4Q6UVK1 2322 aa0.26□□□□□ -2.37
PCNX4-206ENST00000553513 COL6A5A8TX70 2615 aa0.25□□□□□ -2.37
PCNX4-206ENST00000553513 RB1CC1Q8TDY2 1594 aa0.25□□□□□ -2.37
PCNX4-206ENST00000553513 CEP162Q5TB80 1403 aa0.25□□□□□ -2.37
PCNX4-206ENST00000553513 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
PCNX4-206ENST00000553513 KIAA1109Q2LD37 5005 aa0.25□□□□□ -2.37
PCNX4-206ENST00000553513 LTN1O94822 1766 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 BCORQ6W2J9 1755 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 PCLOQ9Y6V0 5065 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 CHD6Q8TD26 2715 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 MYO3AQ8NEV4 1616 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 NKTRP30414 1462 aaKnown RBP0.24□□□□□ -2.37
PCNX4-206ENST00000553513 CLIP1P30622 1438 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 KRTAP20-1Q3LI63 56 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 MRPL34Q9BQ48 92 aaKnown RBP0.24□□□□□ -2.37
PCNX4-206ENST00000553513 MUC2Q02817 5179 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 RGPD8O14715 1765 aaPredicted RBP0.24□□□□□ -2.37
PCNX4-206ENST00000553513 RGPD5Q99666 1765 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 QSER1Q2KHR3 1735 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 SCRIBQ14160 1630 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 MAP3K4Q9Y6R4 1608 aa0.24□□□□□ -2.37
PCNX4-206ENST00000553513 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
PCNX4-206ENST00000553513 VWFP04275 2813 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 IQCF6A8MYZ5 107 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 ACYP1P07311 99 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 HMGA1P17096 107 aaKnown RBP0.23□□□□□ -2.37
PCNX4-206ENST00000553513 TDRG1Q3Y452 100 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 UBR1Q8IWV7 1749 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 TEP1Q99973 2627 aaKnown RBP0.23□□□□□ -2.37
PCNX4-206ENST00000553513 ALKQ9UM73 1620 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 NEXMIFQ5QGS0 1516 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 PKD1L1Q8TDX9 2849 aa0.23□□□□□ -2.37
PCNX4-206ENST00000553513 LRRC9Q6ZRR7 1453 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 TRANK1O15050 2925 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 KANTRA0A1W2PQU2 76 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 GAFA1Q96PS6 74 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 ATRQ13535 2644 aa0.22□□□□□ -2.37
PCNX4-206ENST00000553513 DSTQ03001 7570 aaKnown RBP0.22□□□□□ -2.37
PCNX4-206ENST00000553513 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 KMT2DO14686 5537 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 NDUFB1O75438 58 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 COX7BP24311 80 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 LINC00643Q86TS7 51 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
PCNX4-206ENST00000553513 SCN11AQ9UI33 1791 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 CHD8Q9HCK8 2581 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 STAB1Q9NY15 2570 aa0.21□□□□□ -2.38
PCNX4-206ENST00000553513 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
PCNX4-206ENST00000553513 KIF14Q15058 1648 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
PCNX4-206ENST00000553513 NEBP20929 6669 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 SETXQ7Z333 2677 aaKnown RBP0.2□□□□□ -2.38
PCNX4-206ENST00000553513 CEBPZOSA8MTT3 80 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 H1FX-AS1Q4G0G2 97 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 S100A13Q99584 98 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 CDKN2A-AS1Q9UH64 79 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 RYR2Q92736 4967 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 CCDC18Q5T9S5 1454 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 TENM4Q6N022 2769 aa0.2□□□□□ -2.38
PCNX4-206ENST00000553513 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
PCNX4-206ENST00000553513 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
PCNX4-206ENST00000553513 KMT2AQ03164 3969 aa0.19□□□□□ -2.38
PCNX4-206ENST00000553513 PTPN23Q9H3S7 1636 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms