RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 ZNF861PO60384 105 aa10.08□□□□□ -0.8
BRF1-219ENST00000551787 LINC00158P58513 81 aa10.08□□□□□ -0.8
BRF1-219ENST00000551787 COX17Q14061 63 aa10.08□□□□□ -0.8
BRF1-219ENST00000551787 BCE1O60756 84 aa10.07□□□□□ -0.8
BRF1-219ENST00000551787 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
BRF1-219ENST00000551787 IGKV2-28A0A075B6P5 120 aa10.06□□□□□ -0.8
BRF1-219ENST00000551787 IGKV2D-28P01615 120 aa10.06□□□□□ -0.8
BRF1-219ENST00000551787 SFTA2Q6UW10 78 aa10.06□□□□□ -0.8
BRF1-219ENST00000551787 Q8NDZ9 215 aa10.06□□□□□ -0.8
BRF1-219ENST00000551787 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
BRF1-219ENST00000551787 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
BRF1-219ENST00000551787 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
BRF1-219ENST00000551787 VPREB1P12018 145 aa10.05□□□□□ -0.8
BRF1-219ENST00000551787 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
BRF1-219ENST00000551787 RPL24P83731 157 aaKnown RBP10.03□□□□□ -0.8
BRF1-219ENST00000551787 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
BRF1-219ENST00000551787 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
BRF1-219ENST00000551787 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
BRF1-219ENST00000551787 TMEM238C9JI98 176 aa10.01□□□□□ -0.81
BRF1-219ENST00000551787 DPM2O94777 84 aa10.01□□□□□ -0.81
BRF1-219ENST00000551787 PLNP26678 52 aa10.01□□□□□ -0.81
BRF1-219ENST00000551787 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
BRF1-219ENST00000551787 IGLV1-50A0A075B6I6 118 aa10□□□□□ -0.81
BRF1-219ENST00000551787 UBE2AP49459 152 aa10□□□□□ -0.81
BRF1-219ENST00000551787 MAP1LC3CQ9BXW4 147 aa10□□□□□ -0.81
BRF1-219ENST00000551787 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
BRF1-219ENST00000551787 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
BRF1-219ENST00000551787 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 LEPROTO15243 131 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 IGKCP01834 107 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 S100A6P06703 90 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 HERV-K104P63124 156 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
BRF1-219ENST00000551787 PLEKHB2Q96CS7 222 aa9.97□□□□□ -0.81
BRF1-219ENST00000551787 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
BRF1-219ENST00000551787 J3QQQ9 107 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 HERVK_113P61574 105 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 PRLHP81277 87 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 DAND5Q8N907 189 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 ANAPC11Q9NYG5 84 aa9.96□□□□□ -0.82
BRF1-219ENST00000551787 M0R378 163 aa9.95□□□□□ -0.82
BRF1-219ENST00000551787 SNRPEP62304 92 aaKnown RBP9.95□□□□□ -0.82
BRF1-219ENST00000551787 LRP2P98164 4655 aa9.95□□□□□ -0.82
BRF1-219ENST00000551787 SYS1-DBNDD2H3BUS1 97 aa9.94□□□□□ -0.82
BRF1-219ENST00000551787 HIST3H2BBQ8N257 126 aa9.94□□□□□ -0.82
BRF1-219ENST00000551787 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
BRF1-219ENST00000551787 LINC00587B1AMM8 73 aa9.93□□□□□ -0.82
BRF1-219ENST00000551787 NCR3O14931 201 aa9.93□□□□□ -0.82
BRF1-219ENST00000551787 LGALS3P17931 250 aaKnown RBP9.93□□□□□ -0.82
BRF1-219ENST00000551787 A0A087X002 238 aa9.92□□□□□ -0.82
BRF1-219ENST00000551787 S100A2P29034 98 aa9.92□□□□□ -0.82
BRF1-219ENST00000551787 RPL13AP40429 203 aaKnown RBP9.92□□□□□ -0.82
BRF1-219ENST00000551787 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
BRF1-219ENST00000551787 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
BRF1-219ENST00000551787 C3orf79P0CE67 100 aa9.89□□□□□ -0.83
BRF1-219ENST00000551787 NMUP48645 174 aa9.89□□□□□ -0.83
BRF1-219ENST00000551787 CRYGAP11844 174 aa9.88□□□□□ -0.83
BRF1-219ENST00000551787 KRTDAPP60985 99 aa9.88□□□□□ -0.83
BRF1-219ENST00000551787 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
BRF1-219ENST00000551787 E9PLD3 99 aa9.87□□□□□ -0.83
BRF1-219ENST00000551787 PET117Q6UWS5 81 aa9.87□□□□□ -0.83
BRF1-219ENST00000551787 HIGD2AQ9BW72 106 aa9.87□□□□□ -0.83
BRF1-219ENST00000551787 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 TSPAN13O95857 204 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 NPC2P61916 151 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
BRF1-219ENST00000551787 IGKV2D-26A0A0A0MRZ7 120 aa9.85□□□□□ -0.83
BRF1-219ENST00000551787 LPAP08519 4548 aa9.84□□□□□ -0.83
BRF1-219ENST00000551787 PRYO14603 147 aa9.84□□□□□ -0.83
BRF1-219ENST00000551787 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
BRF1-219ENST00000551787 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
BRF1-219ENST00000551787 MIEN1Q9BRT3 115 aa9.84□□□□□ -0.83
BRF1-219ENST00000551787 KCNQ1DNQ9H478 68 aa9.84□□□□□ -0.83
BRF1-219ENST00000551787 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
BRF1-219ENST00000551787 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
BRF1-219ENST00000551787 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
BRF1-219ENST00000551787 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
BRF1-219ENST00000551787 TTTY13Q9BZ97 58 aa9.81□□□□□ -0.84
BRF1-219ENST00000551787 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
BRF1-219ENST00000551787 DDTP30046 118 aa9.8□□□□□ -0.84
BRF1-219ENST00000551787 SPRR1AP35321 89 aa9.8□□□□□ -0.84
BRF1-219ENST00000551787 LINC00337Q8N6G1 96 aa9.8□□□□□ -0.84
BRF1-219ENST00000551787 KRTAP4-16G5E9R7 235 aaPredicted RBP9.79□□□□□ -0.84
BRF1-219ENST00000551787 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
BRF1-219ENST00000551787 TRBV10-2A0A0K0K1G8 114 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 C20orf202A1L168 122 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 PRR4Q16378 134 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 SMCR5Q8TEV8 140 aa9.78□□□□□ -0.84
BRF1-219ENST00000551787 S100A12P80511 92 aa9.77□□□□□ -0.85
BRF1-219ENST00000551787 S100A7L2Q5SY68 101 aa9.77□□□□□ -0.85
BRF1-219ENST00000551787 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
BRF1-219ENST00000551787 LITAFQ99732 161 aa9.77□□□□□ -0.85
BRF1-219ENST00000551787 NDUFC2O95298 119 aa9.76□□□□□ -0.85
BRF1-219ENST00000551787 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms